PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028059866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WOX | ||||||||
Protein Properties | Length: 327aa MW: 38040.9 Da PI: 8.4819 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.5 | 3e-20 | 67 | 125 | 3 | 56 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+++t+eqle+Leel+++ r+psa+++ +++++l +++ ++V++WFqN++a+++ XP_028059866.1 67 SRWNPTPEQLEALEELYRRgIRTPSADQIHHITAQLrqygKIEGKNVFYWFQNHKARDR 125 7*****************99*************************************98 PP | |||||||
2 | Wus_type_Homeobox | 110.9 | 6.8e-36 | 66 | 127 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++RW+PtpeQ++ Leely++G+rtP++++i++ita+L++yGkie+kNVfyWFQN+kaR+r + XP_028059866.1 66 SSRWNPTPEQLEALEELYRRGIRTPSADQIHHITAQLRQYGKIEGKNVFYWFQNHKARDRYH 127 79*********************************************************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MWMIGYNKNK NNRELISIPE PVSFNGGNHR PLIPWPCPCP VNVGEEVEQS KREWKWLNRQ 60 EVSVVSSRWN PTPEQLEALE ELYRRGIRTP SADQIHHITA QLRQYGKIEG KNVFYWFQNH 120 KARDRYHKRR RQVESASHQE YCDIEATEKE ESEASRRTGF EQIKNWAFPI NCSTFAEKNA 180 STIQGGQAKT AVEECITDHR WVQLYEGGKL SHQRRNLCRS RIDLCQCGSK MMQPSSCSPL 240 PTHLINNTNT NTSITMDPAK LKKSTHHNHQ DLKMFIAPAT PRDDQTLQLF PRRSNITEKD 300 ETAEISLAAM NPDFTPYQFF EFLPLKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18010.1 | 3e-44 | WOX family protein |