PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059569.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 634aa MW: 70419.6 Da PI: 6.6365

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.9	3.3e-15	284	343	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_028059569.1 284 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDVEEKAARAYDLAALKYWG 343 78*****************988886678446***********************98 PP
2	AP2	45.7	1.6e-14	388	437	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_028059569.1 388 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 437 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MKSMSNDNNT NTNTNNSNNN CALPTSFFHS PSHFSYSGAC YGVHEAENGA FYSPLTVMPL 60 KSDGSLCIME ALTRSQTPQG METTSTPKLE DFFGGATMGT HHYESCDREA MALSLDSLYY 120 HQQQNPDHET NNNNTSQDFL NHQPQNQIHV QQYSDYSAFR GHEVYQTSPL TEDTKQAQIT 180 TMAAEDEICG MKNWVSRNFH GSHGLGDNGG ESGSMSALGY GDLQSLSLSM SPGSQSSCVT 240 GSHQISPAVT ECVALETKKR GSVKLDQKQT VHRKSIDTFG QRTSQYRGVT RHRWTGRYEA 300 HLWDNSCKKE GQSRKGRQVY LGGYDVEEKA ARAYDLAALK YWGASTHINF PVENYQQELE 360 DMKNMTRQEY VAHLRRKSSG FSRGASMYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST 420 QEEAAEAYDI AAIKFRGVNA VTNFDISRYD VERIMASNTL LAGELARRNK EIESIKEVPN 480 QDLLTLNHTV EATLPKESDG SKSNWEMTLY QHQRQDDGIE NCKNNPSFSM ASDHDLVGNR 540 MIGLDQQEVD ESGKMANHLS NASSLVTSLA SSREGSPDKQ NGLPLLFTMP PSSASAKFAN 600 SSTSAVNSWM SSTQLRPSMS LPHVPVFAAW TDAS

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MKSMSNDNNT NTNTNNSNNN CALPTSFFHS PSHFSYSGAC YGVHEAENGA FYSPLTVMPL  60
KSDGSLCIME ALTRSQTPQG METTSTPKLE DFFGGATMGT HHYESCDREA MALSLDSLYY  120
HQQQNPDHET NNNNTSQDFL NHQPQNQIHV QQYSDYSAFR GHEVYQTSPL TEDTKQAQIT  180
TMAAEDEICG MKNWVSRNFH GSHGLGDNGG ESGSMSALGY GDLQSLSLSM SPGSQSSCVT  240
GSHQISPAVT ECVALETKKR GSVKLDQKQT VHRKSIDTFG QRTSQYRGVT RHRWTGRYEA  300
HLWDNSCKKE GQSRKGRQVY LGGYDVEEKA ARAYDLAALK YWGASTHINF PVENYQQELE  360
DMKNMTRQEY VAHLRRKSSG FSRGASMYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST  420
QEEAAEAYDI AAIKFRGVNA VTNFDISRYD VERIMASNTL LAGELARRNK EIESIKEVPN  480
QDLLTLNHTV EATLPKESDG SKSNWEMTLY QHQRQDDGIE NCKNNPSFSM ASDHDLVGNR  540
MIGLDQQEVD ESGKMANHLS NASSLVTSLA SSREGSPDKQ NGLPLLFTMP PSSASAKFAN  600
SSTSAVNSWM SSTQLRPSMS LPHVPVFAAW TDAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-157	AP2 family protein