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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028059568.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 667aa MW: 73893.4 Da PI: 6.677 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.8 | 3.6e-15 | 317 | 376 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_028059568.1 317 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDVEEKAARAYDLAALKYWG 376 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 45.6 | 1.7e-14 | 421 | 470 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_028059568.1 421 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 470 9***************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 667 aa Download sequence |
MKSMSNDNNT NTNTNNSNNN WLGFSLSSSH MNTIGVSSEP HHQTHISLSG SVSSALPTSF 60 FHSPSHFSYS GACYGVHEAE NGAFYSPLTV MPLKSDGSLC IMEALTRSQT PQGMETTSTP 120 KLEDFFGGAT MGTHHYESCD REAMALSLDS LYYHQQQNPD HETNNNNTSQ DFLNHQPQNQ 180 IHVQQYSDYS AFRGHEVYQT SPLTEDTKQA QITTMAAEDE ICGMKNWVSR NFHGSHGLGD 240 NGGESGSMSA LGYGDLQSLS LSMSPGSQSS CVTGSHQISP AVTECVALET KKRGSVKLDQ 300 KQTVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC KKEGQSRKGR QVYLGGYDVE 360 EKAARAYDLA ALKYWGASTH INFPVENYQQ ELEDMKNMTR QEYVAHLRRK SSGFSRGASM 420 YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG VNAVTNFDIS 480 RYDVERIMAS NTLLAGELAR RNKEIESIKE VPNQDLLTLN HTVEATLPKE SDGSKSNWEM 540 TLYQHQRQDD GIENCKNNPS FSMASDHDLV GNRMIGLDQQ EVDESGKMAN HLSNASSLVT 600 SLASSREGSP DKQNGLPLLF TMPPSSASAK FANSSTSAVN SWMSSTQLRP SMSLPHVPVF 660 AAWTDAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-157 | AP2 family protein |