PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059276.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 665aa MW: 73688.7 Da PI: 7.0354

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059276.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.8e-16	306	365	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_028059276.1 306 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 365 78*****************988886678446***********************98 PP
2	AP2	45.8	1.5e-14	410	459	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_028059276.1 410 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 459 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MKSTNDNNNG SNSHNNNWLG FSLSPHMKME VSSNPHHQYS HHLHQPQQVL PSSFYISPFS 60 HLNSAAICYG VGENGGFHSP LSVMPLKSDG SLCIMEALSR SQPPPPPPQG MVPNTSPKLE 120 DFLGGATMAA HHQYSTHERE AMALSLDSMY YHHQNADRQT NRQQQQQEMD EVQQPHHYYY 180 GLSCNDGLYQ QTPLEEQREE ETRETQLADS DNTQISACLK NWIVVEDCGG ACGSGGGAVA 240 GCGDLQSLSL SMSPGSQSSC VTAPTQISPT GTESTVMETK KRGSAKVALK QPVHRKSIDT 300 FGQRTSQYRG VTRHRWTGRY EAHLWDNSCK KEGQTRKGRQ VYLGGYDMEE KAARAYDLAA 360 LKYWGPSTHI NFPLEKYQEQ LEEMKNMTRQ EYVAHLRRKS SGFSRGASMY RGVTRHHQHG 420 RWQARIGRVA GNKDLYLGTF STQEEAAEAY DVAAIKFRGS NAVTNFDVSR YDVERITASN 480 TLLAGDLARR NKEREPSNEV IEYHSSGQNN EDLPVQPASN NANVSDWKMV FYQSPQQQQQ 540 QNVIVDEKQL CTGNYRSSAF SMALHDLIGI DSVNSSQPIM DDESAKLGAH FSNTSSLVTS 600 LSSSREASPD KNSPSMFFAK PPLAAKFVGP APTIGSWIPS AAAQLRAAAP LTMAHLPVFA 660 AWNDT

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MKSTNDNNNG SNSHNNNWLG FSLSPHMKME VSSNPHHQYS HHLHQPQQVL PSSFYISPFS  60
HLNSAAICYG VGENGGFHSP LSVMPLKSDG SLCIMEALSR SQPPPPPPQG MVPNTSPKLE  120
DFLGGATMAA HHQYSTHERE AMALSLDSMY YHHQNADRQT NRQQQQQEMD EVQQPHHYYY  180
GLSCNDGLYQ QTPLEEQREE ETRETQLADS DNTQISACLK NWIVVEDCGG ACGSGGGAVA  240
GCGDLQSLSL SMSPGSQSSC VTAPTQISPT GTESTVMETK KRGSAKVALK QPVHRKSIDT  300
FGQRTSQYRG VTRHRWTGRY EAHLWDNSCK KEGQTRKGRQ VYLGGYDMEE KAARAYDLAA  360
LKYWGPSTHI NFPLEKYQEQ LEEMKNMTRQ EYVAHLRRKS SGFSRGASMY RGVTRHHQHG  420
RWQARIGRVA GNKDLYLGTF STQEEAAEAY DVAAIKFRGS NAVTNFDVSR YDVERITASN  480
TLLAGDLARR NKEREPSNEV IEYHSSGQNN EDLPVQPASN NANVSDWKMV FYQSPQQQQQ  540
QNVIVDEKQL CTGNYRSSAF SMALHDLIGI DSVNSSQPIM DDESAKLGAH FSNTSSLVTS  600
LSSSREASPD KNSPSMFFAK PPLAAKFVGP APTIGSWIPS AAAQLRAAAP LTMAHLPVFA  660
AWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-133	AP2 family protein