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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028059276.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 665aa MW: 73688.7 Da PI: 7.0354 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.9 | 3.8e-16 | 306 | 365 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_028059276.1 306 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 365 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 45.8 | 1.5e-14 | 410 | 459 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_028059276.1 410 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 459 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 665 aa Download sequence |
MKSTNDNNNG SNSHNNNWLG FSLSPHMKME VSSNPHHQYS HHLHQPQQVL PSSFYISPFS 60 HLNSAAICYG VGENGGFHSP LSVMPLKSDG SLCIMEALSR SQPPPPPPQG MVPNTSPKLE 120 DFLGGATMAA HHQYSTHERE AMALSLDSMY YHHQNADRQT NRQQQQQEMD EVQQPHHYYY 180 GLSCNDGLYQ QTPLEEQREE ETRETQLADS DNTQISACLK NWIVVEDCGG ACGSGGGAVA 240 GCGDLQSLSL SMSPGSQSSC VTAPTQISPT GTESTVMETK KRGSAKVALK QPVHRKSIDT 300 FGQRTSQYRG VTRHRWTGRY EAHLWDNSCK KEGQTRKGRQ VYLGGYDMEE KAARAYDLAA 360 LKYWGPSTHI NFPLEKYQEQ LEEMKNMTRQ EYVAHLRRKS SGFSRGASMY RGVTRHHQHG 420 RWQARIGRVA GNKDLYLGTF STQEEAAEAY DVAAIKFRGS NAVTNFDVSR YDVERITASN 480 TLLAGDLARR NKEREPSNEV IEYHSSGQNN EDLPVQPASN NANVSDWKMV FYQSPQQQQQ 540 QNVIVDEKQL CTGNYRSSAF SMALHDLIGI DSVNSSQPIM DDESAKLGAH FSNTSSLVTS 600 LSSSREASPD KNSPSMFFAK PPLAAKFVGP APTIGSWIPS AAAQLRAAAP LTMAHLPVFA 660 AWNDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-133 | AP2 family protein |