PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028059192.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 244aa MW: 28103 Da PI: 9.3231 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.9 | 3.6e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+S+LCdae+a+iifs++gkl+eys+ XP_028059192.1 9 KRIENKINRQVTFSKRRSGLLKKAHEISILCDAEIALIIFSTKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 102.2 | 6.8e-34 | 82 | 174 | 8 | 100 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++++ + s++ e akLk+++e Lq++qRhl+GedL++L+lkeLq+Le+qL+++lk+iR++Kn+l++e+i+elqkk k+lqe+n+ L+k+++e XP_028059192.1 82 ATDTESQGSWTLENAKLKARLEVLQKNQRHLMGEDLDTLNLKELQNLEHQLDSALKHIRTRKNQLMYESISELQKKDKALQEQNNLLTKQIKE 174 456677889*********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISILCD AEIALIIFST KGKLFEYSTD 60 SCMERILERY ERYSHAERQL IATDTESQGS WTLENAKLKA RLEVLQKNQR HLMGEDLDTL 120 NLKELQNLEH QLDSALKHIR TRKNQLMYES ISELQKKDKA LQEQNNLLTK QIKEKEKKEK 180 EQQAQLEQHQ NHDLNSSSVV ISQSLHSLNI GGAYQAAVGD VEGAPHQIQN NAVMPPWMIS 240 HING |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-94 | MIKC_MADS family protein |