PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028058694.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 251aa MW: 27866.3 Da PI: 7.7611 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.9 | 1.1e-13 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEd l+++++++G+ +W + +++ g+ R++k+c++rw++yl XP_028058694.1 14 RGTWSPEEDITLKNYIEKFGTVsNWISLPQKAGLMRCGKSCRLRWLNYL 62 89******************88*************************97 PP | |||||||
2 | Myb_DNA-binding | 48.6 | 1.8e-15 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd +++ + + +G++ W+ Ia++++ gRt++++k++w++ XP_028058694.1 69 GGFTEEEDNIILSLYHNMGSR-WSVIASHLP-GRTDNDVKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRAPCCDKT KVKRGTWSPE EDITLKNYIE KFGTVSNWIS LPQKAGLMRC GKSCRLRWLN 60 YLRPNIKHGG FTEEEDNIIL SLYHNMGSRW SVIASHLPGR TDNDVKNYWN TKLKKKLLLK 120 NTTFKSTTNT KLNTYCHRNS DCSNTSTSGV LQHAMINANY QQNLVPEVVL SDPIQVPESG 180 SPSTYICSSG GVSTSSQEVT SLSPFENKDG LWPGNGGGGA AQDDDGFLMG LVGSGFYYDL 240 LNDFDFEEKI G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 3e-64 | MYB family protein |