PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028052844.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 551aa MW: 60935.8 Da PI: 6.5133

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028052844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.4	9.9e-15	169	228	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_028052844.1 169 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDMAALKYWG 228 57*****************666664477446***********************98 PP
2	AP2	47.1	6e-15	273	322	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_028052844.1 273 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 322 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MGSMNSNNWL SFPLSPTHPS LPANLHNSQS HHFSLGLVNE NIDNPFQNQE WNLINAHGSD 60 EVPKVADFLG VSSKSENQTD LVGYSEIQAN DTDYLFQSNN LVPVQNALGA TPNNYELQEN 120 ASSLHQSLTL SMGSGKGSTC ETTVENSNSI TTVEAAPRRT LDTFGQRTSI YRGVTRHRWT 180 GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD MAALKYWGTS TTTNFPISNY 240 EKELEEMKHM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL 300 GTFSTEEEAA EAYDIAAIKF RGLNAVTNFD MNRYDVKAIL ESNTLPIGGG AAKRLKEAQA 360 IESSRKREEM IALGSSFQYG SSRSETLQAY PLLQQSPYEQ PQPLLSLQHQ DISQYAQDSS 420 QFHQNYLQTQ LQLHQQSGSY LHHSNQNPQA QFYNNYYQTN PVLLHGLMNM GGSSSSVMDN 480 NGSSGGSYSG GGYLGGGLGM ASNSTPTNAG GSAEELALVK VDYDMPSTGY GSWSGDSVQG 540 SNPGVFTMWN D

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MGSMNSNNWL SFPLSPTHPS LPANLHNSQS HHFSLGLVNE NIDNPFQNQE WNLINAHGSD  60
EVPKVADFLG VSSKSENQTD LVGYSEIQAN DTDYLFQSNN LVPVQNALGA TPNNYELQEN  120
ASSLHQSLTL SMGSGKGSTC ETTVENSNSI TTVEAAPRRT LDTFGQRTSI YRGVTRHRWT  180
GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD MAALKYWGTS TTTNFPISNY  240
EKELEEMKHM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL  300
GTFSTEEEAA EAYDIAAIKF RGLNAVTNFD MNRYDVKAIL ESNTLPIGGG AAKRLKEAQA  360
IESSRKREEM IALGSSFQYG SSRSETLQAY PLLQQSPYEQ PQPLLSLQHQ DISQYAQDSS  420
QFHQNYLQTQ LQLHQQSGSY LHHSNQNPQA QFYNNYYQTN PVLLHGLMNM GGSSSSVMDN  480
NGSSGGSYSG GGYLGGGLGM ASNSTPTNAG GSAEELALVK VDYDMPSTGY GSWSGDSVQG  540
SNPGVFTMWN D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein