PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028052563.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | TCP | ||||||||
Protein Properties | Length: 141aa MW: 15656.5 Da PI: 9.5416 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 66.1 | 1.2e-20 | 46 | 96 | 15 | 65 |
TCP 15 vggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65 v+gR+ RvR++a+caar+F+L++eLG+ +d++t++WLl p+ +t+ XP_028052563.1 46 VEGRGHRVRVPALCAARIFQLTRELGHRSDGQTVDWLLHHIHPSHLPATDP 96 89*****************************************99999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MESQSTCSNS TDQLNRVSAT QLGSDSSKTR KLHSRRRSSP LKKDTVEGRG HRVRVPALCA 60 ARIFQLTREL GHRSDGQTVD WLLHHIHPSH LPATDPNPNP TPLTTTAAAA APSPELDRFP 120 KEGAWENMSF TSLLLLQEER N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 2e-20 | TCP family protein |