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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc017768.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 216aa MW: 24606.3 Da PI: 7.5763 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.6 | 9.5e-30 | 10 | 58 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 rien + rqvtfskRrng+lKKA+ELSvLCdaeva++ifs++gklye++ Cse_sc017768.1_g020.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRGKLYEFA 58 8***********************************************8 PP | |||||||
2 | K-box | 70.4 | 5.5e-24 | 79 | 169 | 7 | 97 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 + ++ ++l++e a + k++e L+ +R+llGe+L++ ++ eL q+e+qLe+s++ iR++K++++ eqie+l kek+l en L Cse_sc017768.1_g020.1 79 DTSSVEDVQNLKHETAAMAKKVEALEVAKRKLLGEGLGTSTIDELVQIEHQLERSVRIIRARKMKVYNEQIEQLHAKEKMLAAENAIL 166 34567889******************************************************************************** PP K-box 95 rkk 97 ++k Cse_sc017768.1_g020.1 167 TEK 169 998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALVIFSP RGKLYEFANS 60 SMQETIERYR SHVKDIQTDT SSVEDVQNLK HETAAMAKKV EALEVAKRKL LGEGLGTSTI 120 DELVQIEHQL ERSVRIIRAR KMKVYNEQIE QLHAKEKMLA AENAILTEKC IIQTDKATEE 180 MGVDLNVLES GENSDVETEL FIGPPETRMK QLSWPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 3e-84 | MIKC_MADS family protein |