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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc014720.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 143aa MW: 16675 Da PI: 9.0013 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.5 | 3.7e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skR+ngi+KKA+E+ vLCd +v+++i++s+gk+yey+s Cse_sc014720.1_g030.1 9 KRIENTSNRQVTYSKRKNGIIKKAKEITVLCDSNVSLVIYGSSGKMYEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 78.6 | 1.6e-26 | 71 | 142 | 1 | 72 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnel 72 yq+ sg++l++ak+e+lq+e++++kke+e++q e+Rhl+Ge+++sL+++eL + e++Le++l++iR+kK + Cse_sc014720.1_g030.1 71 YQRLSGNKLWDAKHENLQNEIDRIKKENESMQIELRHLKGEEITSLNYEELINYEDALENGLTNIREKKASF 142 7899*****************************************************************865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MGRGKIEIKR IENTSNRQVT YSKRKNGIIK KAKEITVLCD SNVSLVIYGS SGKMYEYCSP 60 KTNLIDMLDR YQRLSGNKLW DAKHENLQNE IDRIKKENES MQIELRHLKG EEITSLNYEE 120 LINYEDALEN GLTNIREKKA SFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 1e-68 | MIKC_MADS family protein |