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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc014091.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 141aa MW: 16508.4 Da PI: 9.5689 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 46.5 | 4.8e-15 | 2 | 38 | 15 | 51 |
HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 15 kRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kR+ngi+KKA+ + vLCda+v+ +i+ s+ k+yey+s Cse_sc014091.1_g040.1 2 KRKNGIIKKAKDIIVLCDANVSFVIYVSSSKMYEYCS 38 9**********************************96 PP | |||||||
2 | K-box | 13.6 | 2.8e-06 | 50 | 77 | 1 | 28 |
K-box 1 yqkssgksleeakaeslqqelakLkkei 28 yq sg++l++ak+e+l++e++++kke+ Cse_sc014091.1_g040.1 50 YQIISGSKLWDAKHENLKNEIDRIKKEN 77 56678999******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MKRKNGIIKK AKDIIVLCDA NVSFVIYVSS SKMYEYCSPK TNLIDMLDRY QIISGSKLWD 60 AKHENLKNEI DRIKKENIRI GILTTMPKIM RKHEQVLKEE NKHLMYLVQQ SEMAAAMGDY 120 QAHEPFALHV QSMQPNLHER M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 6e-39 | MIKC_MADS family protein |