PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62040383-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 1140aa MW: 126769 Da PI: 9.6128

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62040383-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.3	9.6e-10	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE +++++a +++G++ Wk++a+ + +R+ +++ AUR62040383-RA 46 QWSKEELQRFYEAYRKYGKD-WKKVAAAVR-NRSVEMV 81 5***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1140 aa Download sequence
MAPTRKSRSV NKRFSYPNEI SPAKDGDTAN KSNKRKRKVS DMLGAQWSKE ELQRFYEAYR 60 KYGKDWKKVA AAVRNRSVEM VEALYTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLEGSDS 120 EQESNDGVGM PRKSHKRTRG KGHPNTARNF SDVPHSQADA SSYGCLSLLK KKRSGGNQPR 180 AVGKRTPRIP VRYTYDKDSI GRGGSPQVSQ TPNKRRETVS KSPRGLGEGV CSESEMTSAK 240 NVGNEMDDFG CEGSLGSTEG DNNFSREKPQ SGGRKGAGRP AQQKAKKSYG KKVEAEDTEH 300 LGDDIKEACS GTEGGQRFSS FELKLGPEAR DATFIRPSGQ ASKKRSKKVL FGEDEGVALD 360 ALQALADLSF MMPSSTAEAE STVPHKEDKE SDINTFRPQD TMPTSQRVKP KFSPSKKKGD 420 HSMLNSLVSE SKKSKLAKVS ALDSSPVAEI KDLGMRKRKP KSSAFNNAAS EVQMNAGVNA 480 VQEKVPDKGL KSLNKIRQFS NNASQQQLVH LVKISEHSSS STDIRRDGDD SAVSSVQAPE 540 TSKVNVPTKS RSRRKVDKAQ IQRSDIFVNE QSNTSGQSYH DKTVYLKERL CNCLSSHRVR 600 RWCVYEWFYS AIDYPWFAKS EFVEYLYHVG LGHVPRLTRV EWGVIRSSLG KPRRFSQQFL 660 KEEKEKLNYY RESVRSHYSE LRMGKREGLP TDLARPLTVG QRVIAIHPRS REVHNGNVLT 720 VDHNVCRIQF DRPELGVEFV KDIDCMPLNP VENMPSSLKR HDGAIDKFYE ALKQFKANER 780 SEDRMKEEII KLTPSQKMEN ADGTSNIAPF YLISNSSKQA KDVFGTPSSH EKTGQIDVVS 840 PQQVMTQQSA LSHVQVKEAD IRALAELSRA LDKKNALVTE LKRMNDDVYE DHSFKDLEPF 900 KKQYAAVLVQ LNEVLDQVSS ALTCLRQRNT YQGNSLVPWQ KTKSNLDDHG SFVSSLNCLP 960 CDSQRTGSHV CEIVDTSRIK ARKMVDAALK AVSSLDVAVD TIQKIEEVVV FVNNQLMVDD 1020 SGMSVQASQL TGRLSRQNQL SSCNLNVAAS EQAHDSRSNG AVAPREAHIP SELIANCVAT 1080 LLMIQKCTER QFPPAEVAQI LDLAVTTLQP CCSQNIPIYA EIQKCMGIIR SQILALVPT*

Sequence ? help Back to Top

Protein Sequence Length: 1140 aa Download sequence

MAPTRKSRSV NKRFSYPNEI SPAKDGDTAN KSNKRKRKVS DMLGAQWSKE ELQRFYEAYR  60
KYGKDWKKVA AAVRNRSVEM VEALYTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLEGSDS  120
EQESNDGVGM PRKSHKRTRG KGHPNTARNF SDVPHSQADA SSYGCLSLLK KKRSGGNQPR  180
AVGKRTPRIP VRYTYDKDSI GRGGSPQVSQ TPNKRRETVS KSPRGLGEGV CSESEMTSAK  240
NVGNEMDDFG CEGSLGSTEG DNNFSREKPQ SGGRKGAGRP AQQKAKKSYG KKVEAEDTEH  300
LGDDIKEACS GTEGGQRFSS FELKLGPEAR DATFIRPSGQ ASKKRSKKVL FGEDEGVALD  360
ALQALADLSF MMPSSTAEAE STVPHKEDKE SDINTFRPQD TMPTSQRVKP KFSPSKKKGD  420
HSMLNSLVSE SKKSKLAKVS ALDSSPVAEI KDLGMRKRKP KSSAFNNAAS EVQMNAGVNA  480
VQEKVPDKGL KSLNKIRQFS NNASQQQLVH LVKISEHSSS STDIRRDGDD SAVSSVQAPE  540
TSKVNVPTKS RSRRKVDKAQ IQRSDIFVNE QSNTSGQSYH DKTVYLKERL CNCLSSHRVR  600
RWCVYEWFYS AIDYPWFAKS EFVEYLYHVG LGHVPRLTRV EWGVIRSSLG KPRRFSQQFL  660
KEEKEKLNYY RESVRSHYSE LRMGKREGLP TDLARPLTVG QRVIAIHPRS REVHNGNVLT  720
VDHNVCRIQF DRPELGVEFV KDIDCMPLNP VENMPSSLKR HDGAIDKFYE ALKQFKANER  780
SEDRMKEEII KLTPSQKMEN ADGTSNIAPF YLISNSSKQA KDVFGTPSSH EKTGQIDVVS  840
PQQVMTQQSA LSHVQVKEAD IRALAELSRA LDKKNALVTE LKRMNDDVYE DHSFKDLEPF  900
KKQYAAVLVQ LNEVLDQVSS ALTCLRQRNT YQGNSLVPWQ KTKSNLDDHG SFVSSLNCLP  960
CDSQRTGSHV CEIVDTSRIK ARKMVDAALK AVSSLDVAVD TIQKIEEVVV FVNNQLMVDD  1020
SGMSVQASQL TGRLSRQNQL SSCNLNVAAS EQAHDSRSNG AVAPREAHIP SELIANCVAT  1080
LLMIQKCTER QFPPAEVAQI LDLAVTTLQP CCSQNIPIYA EIQKCMGIIR SQILALVPT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein