PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62038847-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TCP

Protein Properties

Length: 241aa MW: 25389.7 Da PI: 6.5029

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62038847-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	83.3	6.2e-26	1	65	24	87
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsss 87 ++a+caar+F+L++eLG+++d++ti+WLlqqa+pai ++tg+++++as+ ++s ss+s +++ AUR62038847-RA 1 MPALCAARVFQLTRELGHKTDGETIQWLLQQAEPAIVAATGSGTIPASFLtASASGASSVSPQGA 65 9**********************************************888633344444433322 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MPALCAARVF QLTRELGHKT DGETIQWLLQ QAEPAIVAAT GSGTIPASFL TASASGASSV 60 SPQGASVSLG LHAKMNELRA GAEVGNRVNW ANFGDGLGRS QSIWPSIGSG YAQNFDGCSA 120 TAASNLVSQN SGYVTNFQLQ GVGMPTANMG LLSFTPILAR GTQVSGLQLG LSQDGHGGVI 180 GQIYQQQQQH QQQQHHHQAQ DHEQNDNSGA AAAETVHSHQ HQHQQQHLQS HSNDDNSREQ 240 *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-35	TCP family protein