PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62035283-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 366aa MW: 41011.7 Da PI: 4.8164

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62035283-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	110.1	2.6e-34	34	172	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sg 81 lp+G++F+Ptd+e++++ L+k+ g++ + +e+i++vd i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + AUR62035283-RA 34 LPRGVKFDPTDQEIIQHLLAKSGIGNEkphpfI--DEFIPTVDeedgICYTHPKNLP-GVKQDGNAAHFFHRAIKAYNTGTRKRRKIHgddlgDV 125 799**********999999866655565442..233555544446******.77888999***************8655565588 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +W++tg++k+v + +ge++g+kk++v+y +++ k+ekt+Wvmh+y+l AUR62035283-RA 126 RWHKTGRTKPVNV-NGEQKGCKKIMVLYvTAKGGKAEKTSWVMHQYHL 172 9********.999*******656888999********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MGTLVEKFAF ASLSMYNLKA ERGTYKVVQE WPGLPRGVKF DPTDQEIIQH LLAKSGIGNE 60 KPHPFIDEFI PTVDEEDGIC YTHPKNLPGV KQDGNAAHFF HRAIKAYNTG TRKRRKIHGD 120 DLGDVRWHKT GRTKPVNVNG EQKGCKKIMV LYVTAKGGKA EKTSWVMHQY HLDDIVPKVD 180 PVTPEPPRNE IRLHSKNQTL AICGNSSAQE CDMGFVDEMQ QHEITISSSV NDATKEDCAD 240 ISSEDPVAEH DDNQVGEEKW WDSESQYLLN SQQLVEGLSL CDELLQSQSP NRDESADDVR 300 KRSVLSSEYA RLGPDDLKKD LEECQNLVLD PANIDLDTPP DFRLSQLEFG SQDSFSAWGL 360 GKMTD*

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MGTLVEKFAF ASLSMYNLKA ERGTYKVVQE WPGLPRGVKF DPTDQEIIQH LLAKSGIGNE  60
KPHPFIDEFI PTVDEEDGIC YTHPKNLPGV KQDGNAAHFF HRAIKAYNTG TRKRRKIHGD  120
DLGDVRWHKT GRTKPVNVNG EQKGCKKIMV LYVTAKGGKA EKTSWVMHQY HLDDIVPKVD  180
PVTPEPPRNE IRLHSKNQTL AICGNSSAQE CDMGFVDEMQ QHEITISSSV NDATKEDCAD  240
ISSEDPVAEH DDNQVGEEKW WDSESQYLLN SQQLVEGLSL CDELLQSQSP NRDESADDVR  300
KRSVLSSEYA RLGPDDLKKD LEECQNLVLD PANIDLDTPP DFRLSQLEFG SQDSFSAWGL  360
GKMTD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-128	NAC family protein