PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62033383-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 175aa MW: 19910.7 Da PI: 9.536 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 63.4 | 2.4e-20 | 9 | 42 | 1 | 34 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-E CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdae 34 krien + rqvtfskRrng+lKKA+ELSvLCdae AUR62033383-RA 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAE 42 79******************************98 PP | |||||||
2 | K-box | 81.8 | 1.6e-27 | 41 | 126 | 14 | 99 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ae+l++e a L k+ie + ++R+llGe+L+s+sl+eLqqLe+qLe+s++kiR++Kn+++ eqi++l++kek l en++L++k+e AUR62033383-RA 41 AENLKEETATLVKKIEAVEASKRRLLGENLGSCSLEELQQLESQLERSVSKIRARKNQVFNEQIKQLREKEKYLAAENTRLTEKYE 126 699*******************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MVRGKTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AENLKEETAT LVKKIEAVEA 60 SKRRLLGENL GSCSLEELQQ LESQLERSVS KIRARKNQVF NEQIKQLREK EKYLAAENTR 120 LTEKYETLPK ESRSQPIIAE DASPSEDTIS QISDVETDLF IGLPESRIRR LTNA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 3e-50 | MIKC_MADS family protein |