PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62032220-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 511aa MW: 55802.4 Da PI: 6.2524

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62032220-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.2	6.1e-13	365	411	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq AUR62032220-RA 365 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAISYITDLQ 411 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MGVNCEINDE DKVMLEDVVG VEACKFLISR VCEDFLSDFN DTGSSDGGML NLQQGLCQIV 60 DGSNWNYAIL WKIVSSKKDG RSVLIWGDGH CRDPKAVVAG ERGDGGEGKL VEGNGEIGKK 120 DEAKKRVLEK LHACFRKSEE NNFVATLDKV SDIEMLYLTS MYYWFWLDSS MGPANCLTSG 180 RPIWVSDGNA CSNHYQSRAH LAKSAKCQTV VFVPVKAGVL ELGSIKMVME EQNLLQVVKH 240 IFDAPQSVQA KAFPKIFGCE LSLGGPKPPS TNLNFTPKLE DDAAFSAESH VGGSNGGAKH 300 TYGSSSNGCV SEDSGKKLVS EINFGGLNPE AQTPGIEPAK EELLLQPKPR KRGRKPANGR 360 EEPLNHVEAE RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAISYITDL QMKVKMLEAE 420 KEMANPKQKH MAIPEIDFQA GQDDALVHVS FPLDLHPASS VVKTLGENQV LAPEANVSTT 480 DNKIIHTFTI RTQNGGAENL KEKLQAALSL *

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MGVNCEINDE DKVMLEDVVG VEACKFLISR VCEDFLSDFN DTGSSDGGML NLQQGLCQIV  60
DGSNWNYAIL WKIVSSKKDG RSVLIWGDGH CRDPKAVVAG ERGDGGEGKL VEGNGEIGKK  120
DEAKKRVLEK LHACFRKSEE NNFVATLDKV SDIEMLYLTS MYYWFWLDSS MGPANCLTSG  180
RPIWVSDGNA CSNHYQSRAH LAKSAKCQTV VFVPVKAGVL ELGSIKMVME EQNLLQVVKH  240
IFDAPQSVQA KAFPKIFGCE LSLGGPKPPS TNLNFTPKLE DDAAFSAESH VGGSNGGAKH  300
TYGSSSNGCV SEDSGKKLVS EINFGGLNPE AQTPGIEPAK EELLLQPKPR KRGRKPANGR  360
EEPLNHVEAE RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAISYITDL QMKVKMLEAE  420
KEMANPKQKH MAIPEIDFQA GQDDALVHVS FPLDLHPASS VVKTLGENQV LAPEANVSTT  480
DNKIIHTFTI RTQNGGAENL KEKLQAALSL *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-148	bHLH family protein