PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62029424-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | TCP | ||||||||
Protein Properties | Length: 159aa MW: 16450.1 Da PI: 6.3321 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 81.1 | 2.8e-25 | 1 | 75 | 24 | 89 |
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........k 89 ++a+caar+F+L++eLG+++d++ti+WLlq a+++i+++tg+++++as+ +++s+s++++s ++ + AUR62029424-RA 1 MPALCAARIFQLTRELGHKSDGETIQWLLQHAEQSIIAATGSGTIPASALaASGASVSQQGTSIISginqqhyhH 75 9**********************************************8885444444444433222443333331 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MPALCAARIF QLTRELGHKS DGETIQWLLQ HAEQSIIAAT GSGTIPASAL AASGASVSQQ 60 GTSIISGINQ QHYHHKIDDL GGPSNRPTNW AAALVGMGAA GELGLSQDVH VGVLTPQALS 120 QIYQQMGHSR SVHDVGSGLS SLHHQQPSDS KDDSQDSG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 7e-25 | TCP family protein |