PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029331-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 328aa    MW: 36697.3 Da    PI: 8.3213
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029331-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.21.8e-54301551127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv+yLk+kv++++l++ ++i+e+d+yk++Pw+Lp k+  +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vls+
  AUR62029331-RA  30 LPPGFRFHPTDEELVVHYLKRKVQSTPLPV-SIIAEIDLYKFDPWELPDKAVFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSS 123
                     79****************************.89***************7777899**************************************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyr 127
                     ++++vg+kk Lvfy g+ p+g+kt+W+mheyr
  AUR62029331-RA 124 GNQKVGVKKALVFYGGKPPRGVKTNWIMHEYR 155
                     *******************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MDNTHSPAAA AGGEPQETMS QPQPPPQPQL PPGFRFHPTD EELVVHYLKR KVQSTPLPVS  60
IIAEIDLYKF DPWELPDKAV FGEQEWYFFS PRDRKYPNGA RPNRAATSGY WKATGTDKPV  120
LSSGNQKVGV KKALVFYGGK PPRGVKTNWI MHEYRWVDAS KPNNNKPPGY DLCHNKKGGS  180
LRLDDWVLCR IYKKNNTTRP MDHEQDDSME DLMMMGGLSS SMSMSCNPTS INNIGLHQPK  240
ANTNSLNYGS FLNTSHVVDQ QGLFEGMMGG THHGAPSSPL LPLKRSLPSL YWGDNDHDSG  300
DFLKWYWVQA SSHHAAQHSL NKFCSPF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.12e-95NAC family protein