PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62029330-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 329aa MW: 36617.2 Da PI: 8.9667 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.6 | 2e-52 | 30 | 153 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+kv++++l++ ++i+e+d+yk++Pw++ + +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vls+ AUR62029330-RA 30 LPPGFRFHPTDEELVVHYLKRKVQSTPLPV-SIIAEIDLYKFDPWNFLAV--FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSS 121 79****************************.89**************744..4789*************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 ++++vg+kk Lvfy g+ p+g+kt+W+mheyr AUR62029330-RA 122 GNQKVGVKKALVFYGGKPPRGVKTNWIMHEYR 153 *******************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MDNTHSPAAA AGGEPQETMS QPQPPPQPQL PPGFRFHPTD EELVVHYLKR KVQSTPLPVS 60 IIAEIDLYKF DPWNFLAVFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK ATGTDKPVLS 120 SGNQKVGVKK ALVFYGGKPP RGVKTNWIMH EYRWVDASKP NNNKPPGYDL CHNKKGGSLR 180 LDDWVLCRIY KKNNTTRPMD HEQDDSMEDL MMMGGLSSSM SMSCNPTSIN NIGLHQPKAN 240 TNSLNYGSFL NTSHVVDQQG LFEGMMGGTH HGAPSSPLLP LKRSLPSLYW GDNDHDSGDN 300 TAVAPTTTDA RGTFRRVFRQ QYPLPGLN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15510.1 | 1e-90 | NAC family protein |