PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022617-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 284aa    MW: 30659 Da    PI: 7.4417
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022617-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY993e-31107165259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dpk++++tY++eHnh+
  AUR62022617-RA 107 SDMWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRSDPKMFIVTYTSEHNHP 165
                     79*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
LFQFSNPFEP CTSTTSFELQ DICKPLICST ATTANSSVTI HNTNSFQSLS SASLASPLRG  60
LIKPSHVIFG TSSPSNAGNN ASQTQRTKKR KNLMKKVCHV PAEGLSSDMW AWRKYGQKPI  120
KGSPYPRGYY RCSSSKGCLA RKQVERNRSD PKMFIVTYTS EHNHPMPTHR NSLAGSTRQK  180
PLTTTGTPPE QPTCSSPSAA SLSPLTEKSE SKTEGDELIK EEDDTSEMAL SDLMLNDDFY  240
VGFEQIDGGS DGSDCFSDHF SPSSAEFPWL SNSSSTAAAA GGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-65WRKY family protein