PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62020401-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 482aa MW: 52486.6 Da PI: 6.7865

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62020401-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.7	6.3e-30	233	291	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+ +Cpv+k+v+r+aed++++++tYeg+Hnh+ AUR62020401-RA 233 SDGCQWRKYGQKMAKGNPCPRAYYRCTMGvSCPVRKQVQRCAEDNSILITTYEGHHNHN 291 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MDFFQGSTFF SQGILKEGGT NKADNNGGDI RXXXXXXXXL KLQLDTGLKL QVARNFDFVE 60 KTTVGDEVEM LESHDENQNA KDEMIILREE IARKSVENQR LKTLLDQVTS SHQALQMQIM 120 TIRQHQLDQN KSIKVHPTET LINDDGVINE KRKQQMGQFL GPKQENNTDG GDKRRSNSNS 180 SDNNRDYEQL NKSTSNVQRV GGTATVETEE AHEVTMRRAR VSVRARSEAN MISDGCQWRK 240 YGQKMAKGNP CPRAYYRCTM GVSCPVRKQV QRCAEDNSIL ITTYEGHHNH NLPPEAVPMA 300 STTTSAASML IAGSKSSSPM DGLLCPSIFS QSTALPGLPS LATISASAPF PTITLDLTRP 360 QGSQPQGNNN SNMPCANANG PALMGLMQQL LGHGPNNFLG SNEPNRENSN LPSVDPLSIA 420 KAALASDPNL ASALATAISS IIKGNYDSIN NVNNNGKSSE IVMGKQISKD NNSDLSNLSE 480 N*

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MDFFQGSTFF SQGILKEGGT NKADNNGGDI RXXXXXXXXL KLQLDTGLKL QVARNFDFVE  60
KTTVGDEVEM LESHDENQNA KDEMIILREE IARKSVENQR LKTLLDQVTS SHQALQMQIM  120
TIRQHQLDQN KSIKVHPTET LINDDGVINE KRKQQMGQFL GPKQENNTDG GDKRRSNSNS  180
SDNNRDYEQL NKSTSNVQRV GGTATVETEE AHEVTMRRAR VSVRARSEAN MISDGCQWRK  240
YGQKMAKGNP CPRAYYRCTM GVSCPVRKQV QRCAEDNSIL ITTYEGHHNH NLPPEAVPMA  300
STTTSAASML IAGSKSSSPM DGLLCPSIFS QSTALPGLPS LATISASAPF PTITLDLTRP  360
QGSQPQGNNN SNMPCANANG PALMGLMQQL LGHGPNNFLG SNEPNRENSN LPSVDPLSIA  420
KAALASDPNL ASALATAISS IIKGNYDSIN NVNNNGKSSE IVMGKQISKD NNSDLSNLSE  480
N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	8e-67	WRKY family protein