PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62019043-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 218aa MW: 24505.7 Da PI: 4.8663 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.6 | 2.8e-27 | 18 | 68 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr gi+KKAeELSvLCda++a+iifs tgkl+++s+ AUR62019043-RA 18 KKIDNITARQVTFSKRRRGIFKKAEELSVLCDADIALIIFSATGKLFDFSN 68 68***********************************************85 PP | |||||||
2 | K-box | 40.3 | 1.3e-14 | 96 | 170 | 15 | 89 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqe 89 + + +lakL++e+ +e+R+l GedL+ +l+eL qLe+ Le+sl+++ ++K ++l+e+ ++l++k++el++ AUR62019043-RA 96 QLENSNLAKLNSEVADKNQELRKLRGEDLQGVDLEELLQLERILEDSLSRVLETKGDVLMEENQKLKQKMNELSQ 170 445667889999999999******************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MAGRSSSSSM AREKIKIKKI DNITARQVTF SKRRRGIFKK AEELSVLCDA DIALIIFSAT 60 GKLFDFSNSR VKDILARYTT YANYEKKEEE PFLELQLENS NLAKLNSEVA DKNQELRKLR 120 GEDLQGVDLE ELLQLERILE DSLSRVLETK GDVLMEENQK LKQKMNELSQ GRKPVLLLDQ 180 SDTSTIHEEG QYSSESITNG GPPLTEDDSS DTSLKLG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24540.1 | 1e-65 | MIKC_MADS family protein |