PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62018752-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 326aa MW: 37194.4 Da PI: 5.2626 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 170 | 7.6e-53 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv++yLk+kveg ++el evi+ +d yk++Pw+Lp k + +++ ew+fF +rdkky++g+r+nrat++gyWkatgkd++v+ AUR62018752-RA 6 LPPGFRFHPTDEELVDYYLKRKVEGLEIEL-EVIPVIDFYKFDPWELPdKsFLPKRDMEWFFFYPRDKKYPNGSRSNRATRAGYWKATGKDRKVV 99 79****************************.99**************96434556788************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++g +ktLvfy+grap g++tdWvmheyrl AUR62018752-RA 100 C-ESSVTGYRKTLVFYQGRAPLGSRTDWVMHEYRL 133 *.9999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MEGATLPPGF RFHPTDEELV DYYLKRKVEG LEIELEVIPV IDFYKFDPWE LPDKSFLPKR 60 DMEWFFFYPR DKKYPNGSRS NRATRAGYWK ATGKDRKVVC ESSVTGYRKT LVFYQGRAPL 120 GSRTDWVMHE YRLCDEMTPN TKGAFALCRV VKKSGFNEEV KSKRAGSSSS NREYMPTDVS 180 NELLSGSSDN QYNSSNYSTS ISSPYITPRA DFETTASLSS QSPSMWVSPD LILDSSKEFS 240 RGQRMATDYI PQCDFQNPMS TWQPHQGNSP RSSYATFSEI EHDLNQIGCM SPYSANMDYM 300 GYDGNVGMLY DGYDTINALT YQNPF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 3e-95 | NAC family protein |