PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015629-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 302aa    MW: 33805.2 Da    PI: 9.2472
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015629-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.87.3e-5211225127
             NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                     frFhPtdeelvv+yLk+kv++++l++ ++i+e+d+yk++Pw+Lp+k+  +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vls+++++
  AUR62015629-RA   1 FRFHPTDEELVVHYLKRKVQSTPLPV-SIIAEIDLYKFDPWELPAKAVFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSSGNQK 94 
                     8*************************.89***************8777899******************************************** PP

             NAM 100 vglkktLvfykgrapkgektdWvmheyr 127
                     vg+kk Lvfy g+ p+g+kt+W+mheyr
  AUR62015629-RA  95 VGVKKALVFYGGKPPRGVKTNWIMHEYR 122
                     ***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
FRFHPTDEEL VVHYLKRKVQ STPLPVSIIA EIDLYKFDPW ELPAKAVFGE QEWYFFSPRD  60
RKYPNGARPN RAATSGYWKA TGTDKPVLSS GNQKVGVKKA LVFYGGKPPR GVKTNWIMHE  120
YRWVDASKPN NNKPPGYDLC HNKKGGSLRL DDWVLCRIYK KNNTTRPMDH ERDDSMEDMM  180
MMGGLSSSSM SMSCNPTSIN NVGLHQPKAN TNSLNYGSFL NTSHVVDQQG LFEGIMGGSQ  240
HHGMVDHHGA PSSPLLPLKR SMPSLFWGDN TDPESGCGGS PGKRLSMLQM SIDNNNNNTT  300
IV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.12e-97NAC family protein