PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62012948-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 146aa MW: 17407.9 Da PI: 10.1202 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 157.7 | 5e-49 | 12 | 138 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yLk+ v+g+k++ ++i ++iy+++PwdLp +k +e+ewyfF++rd+k+++g r+nr+t++g+Wkatg+d+++ s AUR62012948-RA 12 PGFRFHPTEEELLDFYLKNMVNGRKMQH-DIIGFLNIYRFDPWDLPGLAKIGEREWYFFVPRDRKHSNGGRPNRTTEHGFWKATGSDRKIWSLse 105 9************************999.99***************8888899*************************************98755 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++gl+ktLvfy+grap+g+ktdW+m+eyrl AUR62012948-RA 106 PKRVIGLRKTLVFYQGRAPRGTKTDWIMNEYRL 138 7788***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MDDKTSPNFE LPGFRFHPTE EELLDFYLKN MVNGRKMQHD IIGFLNIYRF DPWDLPGLAK 60 IGEREWYFFV PRDRKHSNGG RPNRTTEHGF WKATGSDRKI WSLSEPKRVI GLRKTLVFYQ 120 GRAPRGTKTD WIMNEYRLPD NYVLPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 6e-84 | NAC family protein |