PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62008004-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 377aa MW: 39910 Da PI: 5.0325

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62008004-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	73.5	3e-23	284	346	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v++L +eN++L++el++l+ e++kl+se+ AUR62008004-RA 284 ERELKRQKRKQSNRESARRSRLRKQAECEELQRRVESLNNENSSLREELKRLSAECEKLTSEN 346 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MGAAEEQTPS KPSKATSSAQ ETQAAVPSYP DWSGPMQAYY GNGATPPFFA STVAAPAPHP 60 YMWAGQHPMM PPYGTPVPYP ALYPPGGVYA HPNMAMTPNP AVALETEGKN LDVKDQNSAK 120 KSKGNSGMGN EKAVETGKAT SGSGNEGASQ SAESGSEGSS DGSDDNNQQA CLYWLLCCAV 180 DLVFRLNLAS SSVQENSATK KGSFDLMLED GANAQNSSGN AAQGSVPGKP VVAATNLNIG 240 MDLWNTSAAG GVKLRPNTGV ASAVAPAMVG REGLMPDHQW IQDERELKRQ KRKQSNRESA 300 RRSRLRKQAE CEELQRRVES LNNENSSLRE ELKRLSAECE KLTSENNSIK EELTQTRGPD 360 SLQSLGENNA SGEADS*

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MGAAEEQTPS KPSKATSSAQ ETQAAVPSYP DWSGPMQAYY GNGATPPFFA STVAAPAPHP  60
YMWAGQHPMM PPYGTPVPYP ALYPPGGVYA HPNMAMTPNP AVALETEGKN LDVKDQNSAK  120
KSKGNSGMGN EKAVETGKAT SGSGNEGASQ SAESGSEGSS DGSDDNNQQA CLYWLLCCAV  180
DLVFRLNLAS SSVQENSATK KGSFDLMLED GANAQNSSGN AAQGSVPGKP VVAATNLNIG  240
MDLWNTSAAG GVKLRPNTGV ASAVAPAMVG REGLMPDHQW IQDERELKRQ KRKQSNRESA  300
RRSRLRKQAE CEELQRRVES LNNENSSLRE ELKRLSAECE KLTSENNSIK EELTQTRGPD  360
SLQSLGENNA SGEADS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	301	307	RRSRLRK
2	301	308	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	1e-90	bZIP family protein