PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007247-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 328aa    MW: 37313.6 Da    PI: 4.7898
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007247-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1707.7e-5361331128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppGfrFhPtdeelv++yLk+kveg ++el evi+ +d yk++Pw+Lp k  + +++ ew+fF +rdkky++g+r+nrat++gyWkatgkd++v+
  AUR62007247-RA   6 LPPGFRFHPTDEELVDYYLKRKVEGLEIEL-EVIPVIDFYKFDPWELPdKsFLPKRDMEWFFFYPRDKKYPNGSRSNRATRAGYWKATGKDRKVV 99 
                     79****************************.99**************96434556788************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +++++g +ktLvfy+grap g++tdWvmheyrl
  AUR62007247-RA 100 C-ESSVTGYRKTLVFYQGRAPLGSRTDWVMHEYRL 133
                     *.9999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEGATLPPGF RFHPTDEELV DYYLKRKVEG LEIELEVIPV IDFYKFDPWE LPDKSFLPKR  60
DMEWFFFYPR DKKYPNGSRS NRATRAGYWK ATGKDRKVVC ESSVTGYRKT LVFYQGRAPL  120
GSRTDWVMHE YRLCDEMTPY TKGAFALCRV VKKSGFNEEV KSKRAGSSSS NREYMPTEVS  180
NELLSGSSDN QYNSSNYSTP ISSPYITPRA DFETTASLSS QSPSMWVSPD LILDSSKDFS  240
QGQNMATDYI PQCDFQNPMS TWQPHQGISP SSSYATFTEI EHVDDLNQIG CMSPYSANMD  300
CMGYDGNMGM LYDGYDTINA LTYQNPF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.12e-95NAC family protein