PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002922-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 340aa    MW: 38180.4 Da    PI: 4.6524
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002922-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.86.2e-3491471128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sg 81 
                     lp+G++F+Ptd+e++++ ++k+  g++     +  +e+i++vd    i++++P++Lp  vk++ + ++fF+++ k+y+tg+rk+r+++     + 
  AUR62002922-RA   9 LPRGVKFDPTDQEIIQHLIAKSGIGNEkphpfI--DEFIPTVDeedgICYTHPKNLP-GVKQDGNATHFFHRAIKAYSTGTRKRRKIHgddlgDV 100
                     799************776666644444565442..233555544446**********.77888999*******************8655565588 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     +W++tg++k+v + +ge++g+kk++v+y +++  k+ekt+Wvmh+y+l
  AUR62002922-RA 101 RWHKTGRTKPVNV-NGEQKGCKKIMVLYvTAKGGKAEKTSWVMHQYHL 147
                     9************.999***********656888999**********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MVVQEWPGLP RGVKFDPTDQ EIIQHLIAKS GIGNEKPHPF IDEFIPTVDE EDGICYTHPK  60
NLPGVKQDGN ATHFFHRAIK AYSTGTRKRR KIHGDDLGDV RWHKTGRTKP VNVNGEQKGC  120
KKIMVLYVTA KGGKAEKTSW VMHQYHLDDI VPKVDPVTPE PPRNEMRLHS KNQTLVICGN  180
SSAQECDVGF VDEMQQHEIT ISSSVNDTKE DCADISSEDP VGEHDDNQVG EEKWWDSESQ  240
YLLNSQQLVE GLSLCDELLQ SQSPNRDESA DDVRKRSVLS SEYARLGPED LKKDLEECQN  300
LELDPANIDL DTPPDFRLSQ LEFGSQDSFS AWGLGKMTD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-127NAC family protein