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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022998665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | WOX | ||||||||
Protein Properties | Length: 213aa MW: 23703.2 Da PI: 8.325 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 69.5 | 4.2e-22 | 14 | 73 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+ +Le+l+e+ r+psae++++++++l +++ ++V++WFqN++a++++ XP_022998665.1 14 SRWNPTKEQISILENLYEQgVRTPSAEQIQQITNRLksygHIEGKNVFYWFQNHKARQRQ 73 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 117.7 | 5.4e-38 | 12 | 75 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+Pt+eQi iLe+ly++G+rtP++e+iq+it++L++yG+ie+kNVfyWFQN+kaR+rqkq XP_022998665.1 12 VSSRWNPTKEQISILENLYEQGVRTPSAEQIQQITNRLKSYGHIEGKNVFYWFQNHKARQRQKQ 75 579***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MEATAEIGGT PVSSRWNPTK EQISILENLY EQGVRTPSAE QIQQITNRLK SYGHIEGKNV 60 FYWFQNHKAR QRQKQKQDHT ATLAYFNHFL PLPPFAPHFP SPNVVCSPYY VHQNNVGVYP 120 HQQSNSTTRR SNSERRSCTN NPGFGYQSCQ TDNPATQTLP LFPTHPTGDL QVGPPPPSPL 180 PPQAMASASA SSSSGMSADE SSGGCRTYFE FFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 5e-39 | WOX family protein |