PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997001.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 733aa MW: 80363.9 Da PI: 7.036

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.8	4.3e-16	368	427	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022997001.1 368 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 427 78*****************988886678446***********************98 PP
2	AP2	45.7	1.6e-14	470	521	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s ++GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022997001.1 470 SVFRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 521 689*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MLPNNIAHLP LLFVEFKETN WVPSSPLLLA QLDSSFQKAK PTIPGLEKKE RRAEEKMKSM 60 NENENNNNNN NNNNNNSSSW LGFSLSPHMK MEVTSSDHPY NHHHSHSASN AFYLSPHYNN 120 NTEIFYGIAE NASLHHSAAA SLSVMPLKSD GSLCIMEALS RSQTEGMVPS SSPKLEDFLG 180 GATMGGRGYF NQNAESEPDR EHSLDLLHRP IRENQQQQQQ ILMQNTHQYY SGLVPSSIGI 240 GGCDPQILPA DDDEIPCLRN WVSRSHYAGA HNSLDQQITG GGGGALVHDG GSGGYSVSIG 300 GMGCGELQSL SLSMSPGSQS SSFTASGQIS LTGGDGTVVE TKKRGPGKLC QKQPVHRKSI 360 DTFGQRTSQY RGVTRHRWTG RYEAHLWDNS CKKEGQTRKG RQVYLGGYDM EEKAARAYDL 420 AALKYWGPST HINFPLENYQ TELEEMKNMS RQEYVAHLRR KSSGFSRGAS VFRGVTRHHQ 480 HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR GVNAVTNFDI SRYDVERIMA 540 SNTLLAGELA RRNKEVVVDP RTDAAAAAVA YDSSVASNNN GGIEMNPDGN GTDWKMALYQ 600 NPSHQQHQQA AATCVAESLD HHHNNKSMGD YPNASFSMAL QNLIGIEALN TTNSHGIEDD 660 LNKQVTHFSN SSSLVTSLSS SREGSPDKTN ASMASKLIGA TSGVGSWYPT PQQLRPTAIS 720 MAHLPVFAAW NDT

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MLPNNIAHLP LLFVEFKETN WVPSSPLLLA QLDSSFQKAK PTIPGLEKKE RRAEEKMKSM  60
NENENNNNNN NNNNNNSSSW LGFSLSPHMK MEVTSSDHPY NHHHSHSASN AFYLSPHYNN  120
NTEIFYGIAE NASLHHSAAA SLSVMPLKSD GSLCIMEALS RSQTEGMVPS SSPKLEDFLG  180
GATMGGRGYF NQNAESEPDR EHSLDLLHRP IRENQQQQQQ ILMQNTHQYY SGLVPSSIGI  240
GGCDPQILPA DDDEIPCLRN WVSRSHYAGA HNSLDQQITG GGGGALVHDG GSGGYSVSIG  300
GMGCGELQSL SLSMSPGSQS SSFTASGQIS LTGGDGTVVE TKKRGPGKLC QKQPVHRKSI  360
DTFGQRTSQY RGVTRHRWTG RYEAHLWDNS CKKEGQTRKG RQVYLGGYDM EEKAARAYDL  420
AALKYWGPST HINFPLENYQ TELEEMKNMS RQEYVAHLRR KSSGFSRGAS VFRGVTRHHQ  480
HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR GVNAVTNFDI SRYDVERIMA  540
SNTLLAGELA RRNKEVVVDP RTDAAAAAVA YDSSVASNNN GGIEMNPDGN GTDWKMALYQ  600
NPSHQQHQQA AATCVAESLD HHHNNKSMGD YPNASFSMAL QNLIGIEALN TTNSHGIEDD  660
LNKQVTHFSN SSSLVTSLSS SREGSPDKTN ASMASKLIGA TSGVGSWYPT PQQLRPTAIS  720
MAHLPVFAAW NDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-127	AP2 family protein