PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994694.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WOX

Protein Properties

Length: 296aa MW: 33155.2 Da PI: 7.826

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994694.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.9	1.3e-21	68	127	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql+ Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ XP_022994694.1 68 SRWNPTPEQLRLLEELYRRgTRTPSADQIQHITAQLrrfgKIEGKNVFYWFQNHKARERQ 127 7***************99************************************97 PP
2	Wus_type_Homeobox	116.5	1.2e-37	67	129	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ+++Leely++G+rtP++++iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk+ XP_022994694.1 67 SSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKR 129 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MWMMGYNDGG DLNFSSDSFN ARKLRPLIPR PLSSPSTNDF FSQFYQMGTD QSKRELNNAP 60 PPPVVVSSRW NPTPEQLRLL EELYRRGTRT PSADQIQHIT AQLRRFGKIE GKNVFYWFQN 120 HKARERQKRR RQMESSDQSI CDIEILERKD SGSGRTVYEV EHTKNWPTST NCRTLVEESL 180 PIQRAPKDST RTQNGCLHSS AATPGGVGGV GIGIGGCRQL MMNTAPIAAT TTTATVTTIM 240 HQNDGVEGLE ESETLQLFPL CSETRNGGCE TVESSGMNSA NVMTPLQFFE FLPLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	1e-39	WOX family protein