PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022985021.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 546aa    MW: 60705.5 Da    PI: 6.341
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022985021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2944e-901845453374
            GRAS   3 elLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     e L+++A++++s+d++la+ +L+rl+++  ++++++p++R+a++f+eAL++ l+      +++ + s++s+ + +++++a+k+fs +sPi+ fsh
  XP_022985021.1 184 EDLVDAADCFDSNDFHLAHVILERLNHRlqSASSAKPLHRAAFFFKEALQSLLST-----SATRHNSSSSWPDIVHTIKAHKAFSAISPIPLFSH 273
                     689************************98677777******************99.....5555667777778********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg....ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                     +t+Nq +lea++ ++ +HiiDfdi+ G+Q++++++++a+++e+    pp +RiT+v+ +e   + e + t+e+L +fA+ l+++f+++++  +++
  XP_022985021.1 274 FTTNQILLEALNASSFIHIIDFDIGFGGQYASFMKEIADKAESrnvvPPVIRITAVVFEE--FAVESRLTRENLCQFAQDLKLRFHIDLVPLQTF 366
                     **************************************888544555***********65..8899999********************9999** PP

            GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklpres 279
                     ++l++++ ++ +gE++a+ l   ++r l +s  ++s    +L  v+ +sP vvv+v+ e  +d +++sF + +l++le+y+++++sl+a  +++ 
  XP_022985021.1 367 KTLSFKSVKFMEGEKVAILLTPTIFRRLGSSNGIAS----FLADVRLVSPCVVVFVDFEgwSDSGKASFKRNLLDSLEFYAMMLESLDAA-GADG 456
                     ****************************88777777....*******************777889**********************998.7899 PP

            GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     e+ + +E ++l+++i  +v  +g++       +  Wre ++++G++pv+ls++a  qa++ll kv+++g++v +++++lvl+W++rpLv++SaWr
  XP_022985021.1 457 EWVRRIETFVLRPKILAAVEGAGRM------AVPLWREVFHSVGMRPVALSQFADFQAECLLGKVQVRGFQVGKRHAELVLCWHERPLVATSAWR 545
                     *******************999998......7999***********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    
MRVPVSNHHS SKPSSAPTPN PKLDSSPSPT AFRPPTTTAT TATPGYEPTS VLDLRRSPSP  60
VAPDNPLSSA DDRHNNSHPL DWDERTLQNL DWESIMGDLG VNDDSNSALK NTTAATTTTT  120
DDNTHDHVPH FSEFLHSQPF DQTAHLLPSD FFLSEPYSNH SAAMLHQTFD FAPNSNDPSL  180
HFLEDLVDAA DCFDSNDFHL AHVILERLNH RLQSASSAKP LHRAAFFFKE ALQSLLSTSA  240
TRHNSSSSWP DIVHTIKAHK AFSAISPIPL FSHFTTNQIL LEALNASSFI HIIDFDIGFG  300
GQYASFMKEI ADKAESRNVV PPVIRITAVV FEEFAVESRL TRENLCQFAQ DLKLRFHIDL  360
VPLQTFKTLS FKSVKFMEGE KVAILLTPTI FRRLGSSNGI ASFLADVRLV SPCVVVFVDF  420
EGWSDSGKAS FKRNLLDSLE FYAMMLESLD AAGADGEWVR RIETFVLRPK ILAAVEGAGR  480
MAVPLWREVF HSVGMRPVAL SQFADFQAEC LLGKVQVRGF QVGKRHAELV LCWHERPLVA  540
TSAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-130GRAS family protein