PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022981823.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 329aa    MW: 36911.3 Da    PI: 8.2997
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022981823.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00042216238123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C +Cg  F++   L  H+r+H
  XP_022981823.1 216 HECAICGAEFTSGQALGGHMRRH 238
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MEEAIMGSKE QALIAKGKRT KRQRLHSPIP FAVPANSSSG EGGFVVDDSN FVAENNDYEV  60
LIQNQNNFST SSSSGGELQP YNTVTEEEED MANCLILLAQ GRPFCSPPKH VNARPVHHLN  120
NVRRFPMENV AVGTEKGGSG WNGYECKTCY RTFPSFQALG GHRASHKKPK AMEAEKKLHL  180
SSDYEEMQFR NNITNSLSLQ LNQRGSLYSS GKAKVHECAI CGAEFTSGQA LGGHMRRHRA  240
MPVRTNTALS LTPMAIETED QRQPKRQRSV LSLDLDLNLP APQEHDQRES FLIKSNQQPQ  300
QQQHNKQQQQ QQQQQPLVFP ARTLVDCHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.11e-62C2H2 family protein