PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022980195.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 550aa    MW: 61163.9 Da    PI: 6.2901
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022980195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS305.81e-931905493374
            GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     e +++ A++++s+d++la+ +L+rl+++ +s++g+p+qR+a++f+eAL++ l+       +  + + +s+ + ++++ a+k+fs +sPi+ fsh+
  XP_022980195.1 190 EDIVRTADCFDSNDFQLAHVILERLNQRlQSSTGKPVQRAAFFFKEALQSLLSA------SNRHNRLSSWPEIVHTIRAYKVFSAISPIPMFSHF 278
                     568899*********************99************************9......4555566666669********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg....ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     t+Nqa+lea++g++ +Hi+Dfdi+ G+Q++++++++a+++e+    pp lRiT+v+++e   + e + ++e+L +fA+ l+++f+++++  +++e
  XP_022980195.1 279 TTNQALLEALNGSSFIHIVDFDIGFGGQYASFMKEIAEKAESrkmiPPVLRITAVVPEE--FAIESRLIRENLCQFAQDLKIRFHIDLVPLRTFE 371
                     *************************************9996556679**********65..8889999********************9999*** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklprese 280
                     +l++++ ++ +gE+ a+ l  +++r l   +s++s + ++L+ v+++sP vvv+v+ e  +d +++sF + ++++le+y+++++sl+a + +  +
  XP_022980195.1 372 TLSFKSVKFMEGEKAAILLTPAIFRRL---GSINS-IGSFLSDVRRVSPCVVVFVNGEgwSDSGAASFKRNLVDSLEFYAMMLESLDAAV-AGGD 461
                     ***************************...66666.777*******************77788999**********************98.5557 PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + + +E ++++++i  +v  +g++       +  Wre ++ aG++pv+ls++a  qa++ll kv+++g++v +++++lvl+W++rpLv++SaWr
  XP_022980195.1 462 WVRRIETFVFRPKILAAVEGAGRM------AAPPWREVFHGAGMRPVALSQFADFQAECLLGKVQVQGFQVGKRHAELVLCWHERPLVATSAWR 549
                     77889*************999998......799************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    
MRVPVSNHQI PSSSPNPKLN SSPSAVATPT PTPTSTPNIT NPCYEPTSVL DLRRSPSPVA  60
PDPHTLSSAP LLPTDDXPNV NNNNNPSLDW DEQALHNLDW DSIMGDLGLH DDSNSAPKNP  120
NPDPNPNPNP NNHVPQFPDF LHSHPFDHQT HLVSPDFFLS EPPYSNHTPT FNSFDLAAPN  180
SNNFSCEFLE DIVRTADCFD SNDFQLAHVI LERLNQRLQS STGKPVQRAA FFFKEALQSL  240
LSASNRHNRL SSWPEIVHTI RAYKVFSAIS PIPMFSHFTT NQALLEALNG SSFIHIVDFD  300
IGFGGQYASF MKEIAEKAES RKMIPPVLRI TAVVPEEFAI ESRLIRENLC QFAQDLKIRF  360
HIDLVPLRTF ETLSFKSVKF MEGEKAAILL TPAIFRRLGS INSIGSFLSD VRRVSPCVVV  420
FVNGEGWSDS GAASFKRNLV DSLEFYAMML ESLDAAVAGG DWVRRIETFV FRPKILAAVE  480
GAGRMAAPPW REVFHGAGMR PVALSQFADF QAECLLGKVQ VQGFQVGKRH AELVLCWHER  540
PLVATSAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-149GRAS family protein