PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978929.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 903aa MW: 99739.7 Da PI: 7.5317

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.4	7.1e-29	504	555	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_022978929.1 504 AEKSISLDVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 555 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 903 aa Download sequence
MMATIPNLLP MLALFLLRAG TSNLNSVPQK PIENHKFKIL PVPSENPDGY CLIKEKMAQA 60 LRYIKDLSDQ QVLAQVWAPV KNGDKVVLST SGQPFVLDTQ SNGLHRYRLV SLTYMFSLDT 120 ELDGSLGLPG RVFQQKLPEW TPNVQYYSSK EYSRLRHALD YNVQGTLALP VFDPSGQSCL 180 GVLELIMTSP RINYAPEVDK VCKALQAVNL KSSEILDRPN IQICNEGRQN ALAEILAVLT 240 VVCETHNLPL AQTWVPCRHR NVLANGGGLK KSCTSFDGSC MGRICMSATE VASYVVDAHK 300 WGFREACLEH HLQKGQGVSG RAFSSHSSCF CGDITQFCKN EYPLVHYALM FGLKSCFSIC 360 LRSKFTGDDE YILEFFLPPS LVDYQEQKTL LGAMMGTMKQ HFYTLKVASG INLEEGGIVE 420 VVQASRNGGF ESRLECIHIP PESDAMPNAG EVVALETLQQ RSLMVHDAPK DENNTVRDRE 480 SDNPVPCVQN KEVKKTSKRK RGKAEKSISL DVLQQYFAGS LKDAAKSLGV CPTTMKRICR 540 QHGISRWPSR KINKVNRSLS KLKRVIDSVQ GNEGTFGMSS LATSPLPVAV SSSSHPLTPD 600 GSNQNFFFAS QPSDPQCKET NTSEAQTNNT QARLKDQLLR GVSNPEELFH EQNGSLMKLG 660 NGFNNFRTGS GSRDESTGTP TSHGSCQGSP ANESNPLSIH HHEQCVRRGS PEAAAFHPID 720 KPNKSTRACP VSDTLLMVEP KEPFGGMLIK DAGSSKDLKN LCASVADAIL DDQVPKFCWP 780 RPSDIAMRQP MESVCHTVPH ISARQEPSRM TIKATYKDDI IRFQISTCTG IVELREEVAK 840 RLKLDVGTFD IKYMDDDREW VLTACDADLQ ECVDISKASG SNIIRLLVHD LSVNLGSSCE 900 STR

Sequence ? help Back to Top

Protein Sequence Length: 903 aa Download sequence

MMATIPNLLP MLALFLLRAG TSNLNSVPQK PIENHKFKIL PVPSENPDGY CLIKEKMAQA  60
LRYIKDLSDQ QVLAQVWAPV KNGDKVVLST SGQPFVLDTQ SNGLHRYRLV SLTYMFSLDT  120
ELDGSLGLPG RVFQQKLPEW TPNVQYYSSK EYSRLRHALD YNVQGTLALP VFDPSGQSCL  180
GVLELIMTSP RINYAPEVDK VCKALQAVNL KSSEILDRPN IQICNEGRQN ALAEILAVLT  240
VVCETHNLPL AQTWVPCRHR NVLANGGGLK KSCTSFDGSC MGRICMSATE VASYVVDAHK  300
WGFREACLEH HLQKGQGVSG RAFSSHSSCF CGDITQFCKN EYPLVHYALM FGLKSCFSIC  360
LRSKFTGDDE YILEFFLPPS LVDYQEQKTL LGAMMGTMKQ HFYTLKVASG INLEEGGIVE  420
VVQASRNGGF ESRLECIHIP PESDAMPNAG EVVALETLQQ RSLMVHDAPK DENNTVRDRE  480
SDNPVPCVQN KEVKKTSKRK RGKAEKSISL DVLQQYFAGS LKDAAKSLGV CPTTMKRICR  540
QHGISRWPSR KINKVNRSLS KLKRVIDSVQ GNEGTFGMSS LATSPLPVAV SSSSHPLTPD  600
GSNQNFFFAS QPSDPQCKET NTSEAQTNNT QARLKDQLLR GVSNPEELFH EQNGSLMKLG  660
NGFNNFRTGS GSRDESTGTP TSHGSCQGSP ANESNPLSIH HHEQCVRRGS PEAAAFHPID  720
KPNKSTRACP VSDTLLMVEP KEPFGGMLIK DAGSSKDLKN LCASVADAIL DDQVPKFCWP  780
RPSDIAMRQP MESVCHTVPH ISARQEPSRM TIKATYKDDI IRFQISTCTG IVELREEVAK  840
RLKLDVGTFD IKYMDDDREW VLTACDADLQ ECVDISKASG SNIIRLLVHD LSVNLGSSCE  900
STR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein