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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022975787.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | WOX | ||||||||
Protein Properties | Length: 274aa MW: 31345.1 Da PI: 5.3851 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.2 | 4.3e-21 | 101 | 161 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps++++++++ +l +++e++V++WFqNrRa+ k+ XP_022975787.1 101 RQRWTPTPVQLQILERIFDEgNGTPSKQKIKDITLQLiqygQISEANVYNWFQNRRARSKR 161 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 100.8 | 1e-32 | 100 | 163 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++it +L +yG+i+++NV++WFQNr+aR+++kq XP_022975787.1 100 ARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITLQLIQYGQISEANVYNWFQNRRARSKRKQ 163 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MMEWQNQQQQ QNQTEQLQMQ MQVEQLSNDA DGVGGLYVKV MTDEQMELLR QQISVYASIC 60 DQLVEMHKAI TAQQDLAGMR LGNLYCDPIM ACAAGHKITA RQRWTPTPVQ LQILERIFDE 120 GNGTPSKQKI KDITLQLIQY GQISEANVYN WFQNRRARSK RKQANSAPNN ADSEPETEVD 180 SPKEKKTKPE TFQAYEHFVP KLSNVYSQRS ELGAEILSFD TQTNKGEPMF QSFGSGHISQ 240 MTPTQNHRNN MSNEKMNVPD YSPYSPCEGY HLVE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 155 | 163 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 4e-71 | WOX family protein |