PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022968648.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 305aa    MW: 34335.3 Da    PI: 6.9093
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022968648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.00039173195123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C +Cg  F++   L  H+r+H
  XP_022968648.1 173 HECAICGAEFTSGQALGGHMRRH 195
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEVDHEDGVM GSKEQALIAK ENNDFVAENK DYVAVPVHNV SFSPSSSSAE LQPYIATDEE  60
EDMANCLILL AQGRPQTPKH VDNNRSTAGA EKGVGIGCYG YECKTCYRTF PSFQALGGHR  120
ASHKKSKAIE AEKKVLLCSD DEEIQFKNNM THSISLQLNQ KGSLCSNGKG KVHECAICGA  180
EFTSGQALGG HMRRHRAMPV AMNTALSLTP MAMEGEDQRQ PKRQRNMVSL DLDLNLPAPQ  240
EHDHHRESKF MIKSNQYQQQ QTQHQTQQQT QHQTQQQQQY KQQQQQQQQQ QPLVFPARTL  300
VDCHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.13e-48C2H2 family protein