PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024988089.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 346aa MW: 40063.4 Da PI: 5.0499 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 150.2 | 1e-46 | 10 | 138 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPt+eel+++yLkk v+gk++ +++i ++iy ++Pw Lp k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++s XP_024988089.1 10 LPGFRFHPTEEELLDFYLKKMVSGKNNLRFDIIGYLNIYLYDPWALPGLSKIGEREWYFFVPRDRKHGSGGRPNRTTQNGFWKATGSDRKIFSLt 104 59************************88889****************8778899**************************************986 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ glkktLvfykgrap+g+ktdWvm+eyrl XP_024988089.1 105 dPKKPLGLKKTLVFYKGRAPRGNKTDWVMNEYRL 138 67788***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence |
MDPTYLELQL PGFRFHPTEE ELLDFYLKKM VSGKNNLRFD IIGYLNIYLY DPWALPGLSK 60 IGEREWYFFV PRDRKHGSGG RPNRTTQNGF WKATGSDRKI FSLTDPKKPL GLKKTLVFYK 120 GRAPRGNKTD WVMNEYRLPD SYPLHKEIVL CKIYRKATSM KVLEQRAAME EVTKTIQPST 180 PLSLEEPISF YTQNDNLASS LPTPMESCHM ASDNSDEFHQ DLLLFWDEKL KDESSPPPAP 240 ITPTESFHVL SDNHDESCHD LMFMLDEKLK EEPDVISDAN SSNTDNDNSI SKVSSLRLPT 300 ENEMLRELQL PKMNTDWTQD SFWTQLCSPW LDNIMLTSPY ANILNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-99 | NAC family protein |