PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024986311.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 324aa MW: 36534.9 Da PI: 6.9057 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.9 | 3.4e-52 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+ +yLk+k+eg ++el evi+ v++yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nrat++gyWkatg+d++v+ XP_024986311.1 6 LPPGFRFHPTDEELIGYYLKRKIEGLEIEL-EVIPVVKLYKFDPWELPeKsFLPKQDMEWFFFCPRDRKYPNGSRTNRATNAGYWKATGNDRKVV 99 79****************************.99**************95344555788************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s k+++ g +ktLvfy+grap g +t W+mheyrl XP_024986311.1 100 S-KSSVLGYRKTLVFYRGRAPFGDRTAWLMHEYRL 133 *.9999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MGSVSLPPGF RFHPTDEELI GYYLKRKIEG LEIELEVIPV VKLYKFDPWE LPEKSFLPKQ 60 DMEWFFFCPR DRKYPNGSRT NRATNAGYWK ATGNDRKVVS KSSVLGYRKT LVFYRGRAPF 120 GDRTAWLMHE YRLCDDVSHG TPSFQGSFTL CRVMKKNEQK TSYVNSEPKT KGIGSGSSNR 180 YSNSIQVTNE PIGNESSFSS PLTSYQKTPI SNEPATSTGP SDPPSFWVSP ALILDSSKEQ 240 TGGQEGRSGC VKQNKFPKPT IPRQPHDQFG ISPSSSYSNF TEEDDLIRFG CMSPYSGDES 300 LMGFFGIEDP TSYEPCDWTN SLEI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 8e-99 | NAC family protein |