PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO64390
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 344aa    MW: 37124.8 Da    PI: 6.3113
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO64390genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-30164222259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dp ++++tY+ eHnh+
  OMO64390 164 SDVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRSDPGMFIVTYTAEHNHP 222
               79*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MEVDWDLHAV VRGCATVTTT SNGGVPTSSF MADLFPQSCF SSFTSHEGFQ GQVLSFPSPV  60
EARNAVEELH ELYKPFFPKS QPLSPQSTPL SSLSSLGLSK DQPQIKKQQE QQQPKQSHAG  120
SVTSAVTTAS SNSATANSHS NSRSKRRKNQ LKRVCQVPAE ALSSDVWAWR KYGQKPIKGS  180
PYPRGYYRCS SSKGCLARKQ VERNRSDPGM FIVTYTAEHN HPAPTHRNSL AGSTRQKPFT  240
PQTATAGDSA KPSPANPTNS SSPTTSVEED LVFQSAKAES REDLGEDEGE DEFGMSDTAV  300
SDDFFEGLEG FADMVTGDCV SNSFPASFDL PWIANNAATP AGGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.16e-72WRKY family protein