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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OMO60550 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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| Family | WRKY | ||||||||
| Protein Properties | Length: 160aa MW: 17645.8 Da PI: 10.4364 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 38.2 | 2.9e-12 | 127 | 149 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS
WRKY 1 ldDgynWrKYGqKevkgsefprs 23
ldDgy+WrKYGqK vk+++fpr+
OMO60550 127 LDDGYRWRKYGQKAVKNNKFPRA 149
59********************6 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 160 aa Download sequence |
MENFHGLFAT SSPLSSSLSL NMSNSLGSYG EFEVGNKGNN GFLLGLMADH HIDHQVPASF 60 NVSNISDHQN KIISFPDQIN GGGLAAAGGN NNNNETEVMK GVGKKKGDKK VRKPRYAFQT 120 RSQVDILDDG YRWRKYGQKA VKNNKFPRAK ALYFARHSVK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G13080.1 | 2e-20 | WRKY family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OMO60550 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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