PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.34
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 309aa    MW: 34758.3 Da    PI: 7.9849
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.34genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.77.7e-52121421128
                          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra 77 
                                  lppGfrFhP+deelv++yL kk++g++     +  + ++ +vd++kvePwdLp+ +  + kewyf+s rd+kyatg+r+nra
  evm.model.AsparagusV1_06.34  12 LPPGFRFHPRDEELVCDYLGKKISGDNgtgssC-GFPTMIDVDLNKVEPWDLPEIACVGGKEWYFYSLRDRKYATGQRTNRA 92 
                                  79***********************99776432.2346999************7666689********************** PP

                          NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                  t++gyWkatgkd+++ + kg+lvg++ktLvfy+grapkg+ktdWvmhe+r+
  evm.model.AsparagusV1_06.34  93 TAAGYWKATGKDRHISR-KGTLVGMRKTLVFYQGRAPKGRKTDWVMHEFRM 142
                                  ***************99.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MSSCLSMMEA RLPPGFRFHP RDEELVCDYL GKKISGDNGT GSSCGFPTMI DVDLNKVEPW  60
DLPEIACVGG KEWYFYSLRD RKYATGQRTN RATAAGYWKA TGKDRHISRK GTLVGMRKTL  120
VFYQGRAPKG RKTDWVMHEF RMEVAVDAPR FAVEEGWVLC RVFYKSRCLS SKPSVDTNNY  180
QYEDRSYSSS LPPLMETYIT FGQTPMSLEG YEQVPCFSKL LHQSSPATAS LRRANPPAPA  240
ITAFKNHGAR FELDSGFNQF DCDKKVIREV LSQLTKLEGS QEEEPHPNLG EGSIESYLSQ  300
NGLSFFGN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.25e-98NAC family protein