PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.2406 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 225aa MW: 25479.6 Da PI: 4.4296 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.1 | 3.2e-14 | 11 | 55 | 3 | 48 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 pGfrFhPt+eel+++yL++ v gkkl + ++i ++++y+++Pw+Lp evm.model.AsparagusV1_04.2406 11 PGFRFHPTEEELLNFYLRRMVLGKKLGF-DIIGTINLYRFDPWELP 55 9************************999.99**************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MDKSGSELDL PGFRFHPTEE ELLNFYLRRM VLGKKLGFDI IGTINLYRFD PWELPGRAPR 60 GSKTDWVMNE YSLPDNSSSI PPPKEDIVLC KIYRKATSLK ELEQRAAMEE DARAALLLGI 120 SSTACTTDTV SSSEFDCNFQ NSHTSFDVDG NNNDELTLVK EEEEIKRGAE TSSSTINSSL 180 VARSVYLPEL QVPRTGMEWQ DTFLTQLRSP WLEQWSPLAN WLNF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 5e-29 | NAC family protein |