PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.2114 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 922aa MW: 101686 Da PI: 6.4758 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.4 | 3.9e-09 | 46 | 85 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 rW +eE ++++ a++ +G++ W+++a+ +g +R+ ++ s + evm.model.AsparagusV1_01.2114 46 RWNKEELKQFYAAFRTYGKN-WRKVAELIG-NRSIDMVESLY 85 8*****************99.*********.***98887765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 922 aa Download sequence |
MGPTKMSRMV NKRTSKASKE WPDKVVTNAN KSKVKKRKLS DMLDYRWNKE ELKQFYAAFR 60 TYGKNWRKVA ELIGNRSIDM VESLYNLNKA YLNLPEGMAT ADGFIAMMTD HYNNLDGSDN 120 EYERKGAPSK ILKPVKSSCA KRELDILKRS DGPCLQNQSV KSSHGCKTKK HLQAFFTDCW 180 PRAVQKRTPR VPITHSQGDG DNFVSASKCI LKSAHDEHTH TEALTLTNGP HGGDSSLISG 240 FQQRSKLIES IKEMCAETDM TNSSDISKKP DDNCLEGCSG RRDADNGLLG NDIRVQDADR 300 IDQSVTQCSA VDPLQILADV SLNIGLEGSA CESLQESSLH GAKQKGGNGF SCHFNKHGSL 360 SANPENDNSK FSVQGVGELF SVQKSNLPGS VTGFHELVNS RISYSRDTEY SSTDFNKTNE 420 SETLLANPES HKPKILVEVD QEYPSSVRYD EILSKEAKLQ QVITPDENTV GKTVSDAEEA 480 KGPHVTMMEK SFAENIAEIE GHAYSSLDES EKKENVGQCL GNQNGIAARF CEVSGKNQDA 540 CFQERELRNP AKFNVLPKEL HDKIVLDQSL DANGISLNPS FKLLCITSMK QATGETVNAI 600 LKATPCADEE VASSPHKRCS QPCMLAKVQS RESDIKTIAD LTRALDKKEE VLKELRQMND 660 VVYGRTDEAL GAESNHVIEH YRKIVKLLNE VNDEVASASY NLRQRNTYIK NSTAPKFSLL 720 KDSTEYDGLP GTLSAEYLSS QNSSLYIEEI VTNAREKART MVDTAVLTMS SLKEGEDAHI 780 RIRGALDSAV NDQSGLDSKL LGTRYSCSAP SAYQNRAPSF TATANAPKGA CLSSANESEI 840 LSALMSECIA TMFMIQNTSE RRFPPADIAR ILEHAVESLQ PRCSQNLPVY RDIEKCMGYI 900 KTQMLSLIET PNTSLPTGIS V* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 2e-47 | MYB_related family protein |