PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028087922.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 424aa MW: 47969.4 Da PI: 4.7525

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028087922.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.5	2.7e-32	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkk.vegkk....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyW 83 lp+G++F+P+d+e++++ L+k v++ k ++++ ++e +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + +W XP_028087922.1 58 LPKGVKFDPSDQEIIWHLLAKAgVDNMKphpfIDEFILtVDEDdGICYTHPQNLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRKIHgddfgDVRW 151 799**********998888734444466553443333444435******.677888899***************86555555889 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tg++k+v+ +g ++g+kk++v+y r k+ekt+Wvmh+y++ XP_028087922.1 152 HKTGRTKPVIL-DGVQTGCKKIMVLYvsPVRGGKAEKTNWVMHQYHF 197 *********.99********6545888889*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MAGQSWLVDS NRIATKIRSA SGLGDPARVN WKSNPSRPCP NCQHIIDNSD VTQEWPGLPK 60 GVKFDPSDQE IIWHLLAKAG VDNMKPHPFI DEFILTVDED DGICYTHPQN LPGVKQDGSV 120 SHFFHRAIKA YNTGTRKRRK IHGDDFGDVR WHKTGRTKPV ILDGVQTGCK KIMVLYVSPV 180 RGGKAEKTNW VMHQYHFGTG EDEKEGEYVI SKVFYQQQQV VKLNEIFQQD FPEGTDSMIA 240 KVDPVTPQSA TPEPPRIDRR FSDVDPIQQP TVTCIEPNAQ HHEMWHVEDE VQAANEKSEC 300 QDSLMVENND NQNGHDPKWW DSESQNLLDS QQLVEALSLC DELLRSQSPY RDGNENEELK 360 GKPCLSDYAH LGPEFLKKDL EACQDLVLDP ANIELDTPPD FRLSQLEFGS QESFLAWGGS 420 NVVE

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MAGQSWLVDS NRIATKIRSA SGLGDPARVN WKSNPSRPCP NCQHIIDNSD VTQEWPGLPK  60
GVKFDPSDQE IIWHLLAKAG VDNMKPHPFI DEFILTVDED DGICYTHPQN LPGVKQDGSV  120
SHFFHRAIKA YNTGTRKRRK IHGDDFGDVR WHKTGRTKPV ILDGVQTGCK KIMVLYVSPV  180
RGGKAEKTNW VMHQYHFGTG EDEKEGEYVI SKVFYQQQQV VKLNEIFQQD FPEGTDSMIA  240
KVDPVTPQSA TPEPPRIDRR FSDVDPIQQP TVTCIEPNAQ HHEMWHVEDE VQAANEKSEC  300
QDSLMVENND NQNGHDPKWW DSESQNLLDS QQLVEALSLC DELLRSQSPY RDGNENEELK  360
GKPCLSDYAH LGPEFLKKDL EACQDLVLDP ANIELDTPPD FRLSQLEFGS QESFLAWGGS  420
NVVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	0.0	NAC family protein