PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082392.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 979aa MW: 107467 Da PI: 4.9411

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.1	4.3e-29	579	630	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l+kyF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_028082392.1 579 AEKSISLEVLQKYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 630 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 979 aa Download sequence
MSDSEEENQD FSPNSRALIT PPPHTAADMD LDLDGSWPFD QISSNPTSLI CLPPSNQPCS 60 SMWFFPDDNA RSTTSTLVTD TGNPDSINES PAESGDNRRL PPPLRLTRLD YPDWSCAIKG 120 RMAQALRCFK ESTDQNVLVQ VWAPVKSGDR YVLTTSGQPF VLDPRSNGLY QYRMASVMYM 180 FSAGGERGGA LGLPGRVFQQ KMPEWTPNVQ YYSSKEYPRL TYALNYNVQG SLALPVFEPS 240 GQSCVGVFEL IMTSPKINYA PEVDKVCKAL EAVNLRSSEI LDHPSTQICN EGRQEALVEI 300 LEILTVVCET HKLPLAQTWV PCRHRSVLAY GGGLKKTCSS FDGGCMEQVC MSTTDVAFYV 360 VDAPMWGFRE ACSEHHLQKG QGVAGRAFES LNSCFCKDIT QFCKTEYPLV HYARMFGLTS 420 SFAICLRSTH TGSDDYILEF FLPPDIRDNR EQHTLLDSIF LTMKQHFRSL KVASGKELEE 480 EGTCVEIIEE SMDEKLDSGL ESVQMSQRSL FPPAPNTLPT GPEIVLLDSL EEQLRIESDA 540 INNKGTQGSV GGAGGVQNAV SLPERKDTRK KSERKRGKAE KSISLEVLQK YFAGSLKDAA 600 KSLGVCPTTM KRICRQHGIS RWPSRKINKV NRSLSKLKRV IESVQGAEGA FTLTSLATTS 660 SLPVAVSHIS QPASLNGPNL QNSAGSKPTD VVEGKNESMA SKIPEIQGQA ATTNKMLGDV 720 VHEQNEFMPE LVEGSSQSKT GSYSREESAG TPTSHGSCQG SPCPGNESLP QNDLAVIPID 780 ETYIVGGSPE LVCQPAKELN FSPSFSIPNA LATIQPQEPF GGMLIEDAGS SHDLKNLCPG 840 LLLDGQVPEY GLTNLRCSEL VPRDTMATPT DRTPCFSARP EMNTVTIKAT YREDIIRFRL 900 SLDAGIHRLK DEVAKRLKLE IGTFDVKYLD DDHEWVLIAC DADLQECLDI SKSSSSNIVR 960 LSVHDVMVNL GSSCESSEE

Sequence ? help Back to Top

Protein Sequence Length: 979 aa Download sequence

MSDSEEENQD FSPNSRALIT PPPHTAADMD LDLDGSWPFD QISSNPTSLI CLPPSNQPCS  60
SMWFFPDDNA RSTTSTLVTD TGNPDSINES PAESGDNRRL PPPLRLTRLD YPDWSCAIKG  120
RMAQALRCFK ESTDQNVLVQ VWAPVKSGDR YVLTTSGQPF VLDPRSNGLY QYRMASVMYM  180
FSAGGERGGA LGLPGRVFQQ KMPEWTPNVQ YYSSKEYPRL TYALNYNVQG SLALPVFEPS  240
GQSCVGVFEL IMTSPKINYA PEVDKVCKAL EAVNLRSSEI LDHPSTQICN EGRQEALVEI  300
LEILTVVCET HKLPLAQTWV PCRHRSVLAY GGGLKKTCSS FDGGCMEQVC MSTTDVAFYV  360
VDAPMWGFRE ACSEHHLQKG QGVAGRAFES LNSCFCKDIT QFCKTEYPLV HYARMFGLTS  420
SFAICLRSTH TGSDDYILEF FLPPDIRDNR EQHTLLDSIF LTMKQHFRSL KVASGKELEE  480
EGTCVEIIEE SMDEKLDSGL ESVQMSQRSL FPPAPNTLPT GPEIVLLDSL EEQLRIESDA  540
INNKGTQGSV GGAGGVQNAV SLPERKDTRK KSERKRGKAE KSISLEVLQK YFAGSLKDAA  600
KSLGVCPTTM KRICRQHGIS RWPSRKINKV NRSLSKLKRV IESVQGAEGA FTLTSLATTS  660
SLPVAVSHIS QPASLNGPNL QNSAGSKPTD VVEGKNESMA SKIPEIQGQA ATTNKMLGDV  720
VHEQNEFMPE LVEGSSQSKT GSYSREESAG TPTSHGSCQG SPCPGNESLP QNDLAVIPID  780
ETYIVGGSPE LVCQPAKELN FSPSFSIPNA LATIQPQEPF GGMLIEDAGS SHDLKNLCPG  840
LLLDGQVPEY GLTNLRCSEL VPRDTMATPT DRTPCFSARP EMNTVTIKAT YREDIIRFRL  900
SLDAGIHRLK DEVAKRLKLE IGTFDVKYLD DDHEWVLIAC DADLQECLDI SKSSSSNIVR  960
LSVHDVMVNL GSSCESSEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein