PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027367117.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 352aa MW: 39962.3 Da PI: 6.5

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027367117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.0001	275	297	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_027367117.1 275 FMCRKCGKAFAVRGDWRTHEKNC 297 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MADPYSNFFS SGFFHYPSSN PSPRHPYVHN FINQNTNTNI NNNTFFHYFH PHHLQSTITS 60 CSSTFSPPSP PLREALPLLS LSPTKQEDEE EQEEDQSMDV EEECNRILHP KEEEQEEDDD 120 SVTVALHIGL PSPSAAEIAS MLSSTNKEQQ QSGDGNNGSE DSSSGFLANR LNKGQYWIPT 180 PSQILIGPTQ FSCPVCCKTF NRYNNMQMHM WGHGSQYRKG PESLRGTQPT GMLRLPCYCC 240 SPGCRNNIDH PRAKPLKDFR TLQTHYKRKH GIKPFMCRKC GKAFAVRGDW RTHEKNCGKL 300 WYCICGSDFK HKRSLKDHIK AFGSGHAAYG IDGFEEEEEP ASEVEQDNDF TQ

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MADPYSNFFS SGFFHYPSSN PSPRHPYVHN FINQNTNTNI NNNTFFHYFH PHHLQSTITS  60
CSSTFSPPSP PLREALPLLS LSPTKQEDEE EQEEDQSMDV EEECNRILHP KEEEQEEDDD  120
SVTVALHIGL PSPSAAEIAS MLSSTNKEQQ QSGDGNNGSE DSSSGFLANR LNKGQYWIPT  180
PSQILIGPTQ FSCPVCCKTF NRYNNMQMHM WGHGSQYRKG PESLRGTQPT GMLRLPCYCC  240
SPGCRNNIDH PRAKPLKDFR TLQTHYKRKH GIKPFMCRKC GKAFAVRGDW RTHEKNCGKL  300
WYCICGSDFK HKRSLKDHIK AFGSGHAAYG IDGFEEEEEP ASEVEQDNDF TQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-129	C2H2 family protein