PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366958.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 347aa MW: 36351.4 Da PI: 4.9129

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366958.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.8	6.7e-37	82	168	3	90
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgka 90 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++++a ++ + + ss++ XP_027366958.1 82 AAKKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVsV--GGTLKIPTTSSARP 168 6899***********************************************************9999955521..11111111222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MEANPNHDGD FNEDDDTHST DISPSEATTP MANPTESPPS AAAPPPDTAA PMKEELTDTE 60 QSGDASLPMS VISMPLAMST PAAKKPSKDR HTKVEGRGRR IRMPATCAAR IFQLTRELGH 120 KSDGETIRWL LEHAEPAIIE ATGTGTIPAI AVSVGGTLKI PTTSSARPEG EDTPRKRRRR 180 ASNSEFIDIN NDQVSVSSGL APIAQTSYGG GVSGSGSGGG LVPLWPASNA GGPFFMFPNS 240 ANPPQYWAIP ATAAPFFNVQ ARPISGFVSA MQIQPNSASD SADTCSPMCS TTATTVPTVS 300 AASTSSAATT TQMLRDFSLE IYDKKELPFL GRPSPNSDPP PTSKPSN

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MEANPNHDGD FNEDDDTHST DISPSEATTP MANPTESPPS AAAPPPDTAA PMKEELTDTE  60
QSGDASLPMS VISMPLAMST PAAKKPSKDR HTKVEGRGRR IRMPATCAAR IFQLTRELGH  120
KSDGETIRWL LEHAEPAIIE ATGTGTIPAI AVSVGGTLKI PTTSSARPEG EDTPRKRRRR  180
ASNSEFIDIN NDQVSVSSGL APIAQTSYGG GVSGSGSGGG LVPLWPASNA GGPFFMFPNS  240
ANPPQYWAIP ATAAPFFNVQ ARPISGFVSA MQIQPNSASD SADTCSPMCS TTATTVPTVS  300
AASTSSAATT TQMLRDFSLE IYDKKELPFL GRPSPNSDPP PTSKPSN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	179	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	9e-72	TCP family protein