PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027360515.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARR-B

Protein Properties

Length: 559aa MW: 61024.6 Da PI: 6.5653

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027360515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.1	4e-28	131	184	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G +kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl XP_027360515.1 131 KPRVVWSVELHQQFVSAVNQL-GLDKAVPKRILELMNVPGLTRENVASHLQKFRL 184 79*****************.******************************8 PP
2	Myb_DNA-binding	40.8	5.1e-13	133	183	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ XP_027360515.1 133 RVVWSVELHQQFVSAVNQLGLDkaVPKRILELMNvPGLTRENVASHLQKFR 183 678**********************************************97 PP
3	Response_reg	33.6	2.1e-12	1	56	53	109
CTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 53 mpgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 mp+mdG++ll++ e +lp+i+++a ++ + + + ++ Ga d+l Kp+ +eel++ XP_027360515.1 1 MPDMDGYKLLEHVGLEM-DLPVIMMSADSTTSAVMKGIRHGACDYLIKPVREEELRN 56 9**********6644.8**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MPDMDGYKLL EHVGLEMDLP VIMMSADSTT SAVMKGIRHG ACDYLIKPVR EEELRNIWQH 60 VVRKMWNENK EHDNSGSVED NDRNKRGNDD AEYTSSVADA AEVVKIPKKR SSLKEEDDLE 120 LETDDPATSK KPRVVWSVEL HQQFVSAVNQ LGLDKAVPKR ILELMNVPGL TRENVASHLQ 180 KFRLYLKRLS GVAQQQNGML NTVPGTIESK LGAPGRLDIQ ALAAAGHVPP ETLAALHAEL 240 LGRPATNIIT TVDQTALLQA SIQGPKHSHV EHAVAYGQPL VKCPSNIGKN FPPSIVTVND 300 TSSGYSAWPS SNNTVGLVGP NSNIERVAVQ NNVLMDILQQ QQMQQHQQKQ QQQVQQQSLV 360 PDQSHSINVQ PSCLVVPSQS SETFQAVNLA SVNHDCSFGR NAIIDYSVLS QKSNNPLSAS 420 KFPGGDTKPQ GVLCGYTAPS ICSMGSSNNS NIQHLQNSIL TFGSTRPLPG LLPTSDRQDP 480 YGFKSGDSLD QVSLRSIGFI GKSTCIPSRF VENGTESSVS DLSQMKLDGN SSGNSLKEEP 540 NFINIPKVSY PILQRYPSQ

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MPDMDGYKLL EHVGLEMDLP VIMMSADSTT SAVMKGIRHG ACDYLIKPVR EEELRNIWQH  60
VVRKMWNENK EHDNSGSVED NDRNKRGNDD AEYTSSVADA AEVVKIPKKR SSLKEEDDLE  120
LETDDPATSK KPRVVWSVEL HQQFVSAVNQ LGLDKAVPKR ILELMNVPGL TRENVASHLQ  180
KFRLYLKRLS GVAQQQNGML NTVPGTIESK LGAPGRLDIQ ALAAAGHVPP ETLAALHAEL  240
LGRPATNIIT TVDQTALLQA SIQGPKHSHV EHAVAYGQPL VKCPSNIGKN FPPSIVTVND  300
TSSGYSAWPS SNNTVGLVGP NSNIERVAVQ NNVLMDILQQ QQMQQHQQKQ QQQVQQQSLV  360
PDQSHSINVQ PSCLVVPSQS SETFQAVNLA SVNHDCSFGR NAIIDYSVLS QKSNNPLSAS  420
KFPGGDTKPQ GVLCGYTAPS ICSMGSSNNS NIQHLQNSIL TFGSTRPLPG LLPTSDRQDP  480
YGFKSGDSLD QVSLRSIGFI GKSTCIPSRF VENGTESSVS DLSQMKLDGN SSGNSLKEEP  540
NFINIPKVSY PILQRYPSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-83	ARR-B family protein