PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359305.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WOX

Protein Properties

Length: 355aa MW: 40097.8 Da PI: 7.0121

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.2	5.1e-22	83	142	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ XP_027359305.1 83 SRWNPTPEQLRALEELYRRgTRTPSAEQIQHITAQLrrfgKIEGKNVFYWFQNHKARERQ 142 7***************99************************************97 PP
2	Wus_type_Homeobox	114.2	6.7e-37	82	144	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk+ XP_027359305.1 82 SSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKR 144 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MWMVGYNEGG EFNMVDHSFN GRKLMPVMLT SLNNASTTTT TPCLTRIHGN DFFSQYHYHH 60 LATVAEQKKR EELNGASPVV VSSRWNPTPE QLRALEELYR RGTRTPSAEQ IQHITAQLRR 120 FGKIEGKNVF YWFQNHKARE RQKRRRQMES DAETPEKKDL SASRTVFEVE RTKNWASSTN 180 SSTLAEESVS IQRAAAKTVT ATDGWLQFDE GELQQRRNIL ERNATWHVMQ LPCPSPAPAT 240 YLINTPPNAT ASCSMATTTT TVTTTTTMDP KLIKTHDLSF FISPQREKGI IYLSSSSSSE 300 DDNCVESQTT LQLFPLRTGD GISDNINDVE TDISASAMNA NLTPSQFFEF LPLKN

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MWMVGYNEGG EFNMVDHSFN GRKLMPVMLT SLNNASTTTT TPCLTRIHGN DFFSQYHYHH  60
LATVAEQKKR EELNGASPVV VSSRWNPTPE QLRALEELYR RGTRTPSAEQ IQHITAQLRR  120
FGKIEGKNVF YWFQNHKARE RQKRRRQMES DAETPEKKDL SASRTVFEVE RTKNWASSTN  180
SSTLAEESVS IQRAAAKTVT ATDGWLQFDE GELQQRRNIL ERNATWHVMQ LPCPSPAPAT  240
YLINTPPNAT ASCSMATTTT TVTTTTTMDP KLIKTHDLSF FISPQREKGI IYLSSSSSSE  300
DDNCVESQTT LQLFPLRTGD GISDNINDVE TDISASAMNA NLTPSQFFEF LPLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	3e-57	WOX family protein